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{
"metadata": {
"accession": "PF22513",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "pfam",
"member_databases": null,
"integrated": "IPR053853",
"hierarchy": null,
"name": {
"name": "Antitoxin FitA-like, ribbon-helix-helix",
"short": "FitA-like_RHH"
},
"description": [
{
"text": "<p>This domain is found in Antitoxin FitA from Neisseria gonorrhoeae and similar bacterial sequences. FitA is the antitoxin component of a type II toxin-antitoxin (TA) system. It binds DNA through its ribbon-helix-helix motif (this entry) [[cite:PUB00039746]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00039746": {
"PMID": 16982615,
"ISBN": null,
"volume": "281",
"issue": "49",
"year": 2006,
"title": "Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs.",
"URL": null,
"raw_pages": "37942-51",
"medline_journal": "J Biol Chem",
"ISO_journal": "J. Biol. Chem.",
"authors": [
"Mattison K",
"Wilbur JS",
"So M",
"Brennan RG."
],
"DOI_URL": "http://dx.doi.org/10.1074/jbc.M605198200"
}
},
"set_info": {
"accession": "CL0057",
"name": "Met_repress"
},
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 16,
"interactions": 0,
"matches": 5352,
"pathways": 0,
"proteins": 5350,
"proteomes": 2800,
"sets": 1,
"structural_models": {
"alphafold": 3973,
"bfvd": 0
},
"structures": 3,
"taxa": 5438
},
"entry_annotations": {
"hmm": 0,
"logo": 0,
"alignment:seed": 313,
"alignment:full": 2149
},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "7e4j",
"name": "X-ray crystal structure of VapB12 antitoxin from mycobacterium tuberculosis in space group P41."
}
}
}