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{
"metadata": {
"accession": "IPR053932",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "interpro",
"member_databases": {
"pfam": {
"PF04504": "Glabrous-enhancer-binding protein-like family, DBD domain"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR053932",
"name": "Glabrous enhancer-binding protein-like, DBD domain",
"type": "Domain",
"children": []
},
"name": {
"name": "Glabrous enhancer-binding protein-like, DBD domain",
"short": "GeBP-like_DBD"
},
"description": [
{
"text": "<p>This entry represents the DNA binding domain (DBD) present in GLABROUS1 enhancer-binding protein (GeBP) and GeBP-like proteins, such as storekeeper and storekeeper-like (STKL) transcription factors. GeBP and GeBP-like proteins play a redundant role in cytokinin hormone pathway regulation [[cite:PUB00153966], [cite:PUB00153967], [cite:PUB00081457]]. Storekeeper was identified as a B-box motif binding factor that regulates expression of patatin, a storage protein in potato [[cite:PUB00081460]]. Storekeeper-like transcription factors STKL1 and STKL2 function as transcription factors in the glucose signalling pathway [[cite:PUB00081459]]. The overall predicted structure of this DNA binding domain (DBD) reveals a bundle of four helices, with helices α1 to α3 making up a single myb-type helix-turn-helix (HTH) domain.</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00081457": {
"PMID": 18162594,
"ISBN": null,
"volume": "146",
"issue": "3",
"year": 2008,
"title": "GeBP and GeBP-like proteins are noncanonical leucine-zipper transcription factors that regulate cytokinin response in Arabidopsis.",
"URL": null,
"raw_pages": "1142-54",
"medline_journal": "Plant Physiol",
"ISO_journal": "Plant Physiol.",
"authors": [
"Chevalier F",
"Perazza D",
"Laporte F",
"Le Henanff G",
"Hornitschek P",
"Bonneville JM",
"Herzog M",
"Vachon G."
],
"DOI_URL": "http://dx.doi.org/10.1104/pp.107.110270"
},
"PUB00081459": {
"PMID": 27031427,
"ISBN": null,
"volume": "104",
"issue": null,
"year": 2016,
"title": "Regulation of Arabidopsis thaliana plasma membrane glucose-responsive regulator (AtPGR) expression by A. thaliana storekeeper-like transcription factor, AtSTKL, modulates glucose response in Arabidopsis.",
"URL": null,
"raw_pages": "155-64",
"medline_journal": "Plant Physiol Biochem",
"ISO_journal": "Plant Physiol. Biochem.",
"authors": [
"Chung MS",
"Lee S",
"Min JH",
"Huang P",
"Ju HW",
"Kim CS."
],
"DOI_URL": "http://dx.doi.org/10.1016/j.plaphy.2016.03.029"
},
"PUB00081460": {
"PMID": 12028578,
"ISBN": null,
"volume": "30",
"issue": "4",
"year": 2002,
"title": "Storekeeper defines a new class of plant-specific DNA-binding proteins and is a putative regulator of patatin expression.",
"URL": null,
"raw_pages": "489-97",
"medline_journal": "Plant J",
"ISO_journal": "Plant J.",
"authors": [
"Zourelidou M",
"de Torres-Zabala M",
"Smith C",
"Bevan MW."
],
"DOI_URL": "http://dx.doi.org/10.1046/j.1365-313X.2002.01302.x"
},
"PUB00153966": {
"PMID": 12535344,
"ISBN": null,
"volume": "33",
"issue": "2",
"year": 2003,
"title": "GeBP, the first member of a new gene family in Arabidopsis, encodes a nuclear protein with DNA-binding activity and is regulated by KNAT1.",
"URL": null,
"raw_pages": "305-17",
"medline_journal": "Plant J",
"ISO_journal": "Plant J",
"authors": [
"Curaba J",
"Herzog M",
"Vachon G."
],
"DOI_URL": "https://doi.org/10.1046/j.1365-313x.2003.01622.x"
},
"PUB00153967": {
"PMID": 35890483,
"ISBN": null,
"volume": "11",
"issue": "14",
"year": 2022,
"title": "Genome-Wide Characterization and Expression Analysis of GeBP Family Genes in Soybean.",
"URL": null,
"raw_pages": "1848",
"medline_journal": "Plants (Basel)",
"ISO_journal": "Plants (Basel)",
"authors": [
"Liu S",
"Liu Y",
"Liu C",
"Zhang F",
"Wei J",
"Li B."
],
"DOI_URL": "https://doi.org/10.3390/plants11141848"
}
},
"set_info": null,
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 96,
"interactions": 0,
"matches": 4892,
"pathways": 0,
"proteins": 4823,
"proteomes": 360,
"sets": 0,
"structural_models": {
"alphafold": 4203,
"bfvd": 0
},
"structures": 0,
"taxa": 1093
},
"entry_annotations": {
"alignment:seed": 66,
"alignment:full": 2683
},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}
