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{
"metadata": {
"accession": "IPR049106",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "interpro",
"member_databases": {
"pfam": {
"PF20947": "Influenza RNA polymerase PB2 N-terminal region"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR049106",
"name": "Influenza RNA polymerase PB2, N-terminal region",
"type": "Domain",
"children": []
},
"name": {
"name": "Influenza RNA polymerase PB2, N-terminal region",
"short": "Flu_PB2_N"
},
"description": [
{
"text": "<p>This entry represents the N-terminal extended region of RNA-directed RNA polymerase subunit PB2 (also known as Polymerase basic protein 2) from Influenza A virus and similar proteins from influenzavirus (orthomyxoviridae). This region is the N-terminal PB1 interaction domain.</p>",
"llm": false,
"checked": false,
"updated": false
},
{
"text": "<p>Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase active site, whereas PB2 and PA/P3 contain, respectively, cap-binding [[cite:PUB00005639]] and endonuclease domains required for transcription initiation by cap-snatching [[cite:PUB00151563]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00005639": {
"PMID": 8806170,
"ISBN": null,
"volume": "42",
"issue": "1-2",
"year": 1996,
"title": "Recombinant-baculovirus-expressed PB2 subunit of the influenza A virus RNA polymerase binds cap groups as an isolated subunit.",
"URL": null,
"raw_pages": "1-9",
"medline_journal": "Virus Res",
"ISO_journal": "Virus Res.",
"authors": [
"Shi L",
"Galarza JM",
"Summers DF."
],
"DOI_URL": "http://dx.doi.org/10.1016/0168-1702(96)01289-0"
},
"PUB00151563": {
"PMID": 26503046,
"ISBN": null,
"volume": "527",
"issue": "7576",
"year": 2015,
"title": "Crystal structure of the RNA-dependent RNA polymerase from influenza C virus.",
"URL": null,
"raw_pages": "114-7",
"medline_journal": "Nature",
"ISO_journal": "Nature",
"authors": [
"Hengrung N",
"El Omari K",
"Serna Martin I",
"Vreede FT",
"Cusack S",
"Rambo RP",
"Vonrhein C",
"Bricogne G",
"Stuart DI",
"Grimes JM",
"Fodor E."
],
"DOI_URL": null
}
},
"set_info": null,
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 29,
"interactions": 0,
"matches": 64327,
"pathways": 15,
"proteins": 64327,
"proteomes": 11,
"sets": 0,
"structural_models": {
"alphafold": 5,
"bfvd": 9
},
"structures": 125,
"taxa": 53677
},
"entry_annotations": {
"alignment:seed": 3,
"alignment:full": 25
},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "3a1g",
"name": "High-Resolution Crystal Structure of RNA polymerase PB1-PB2 subunits from Influenza A Virus"
}
}
}