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{
"metadata": {
"accession": "IPR034468",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "interpro",
"member_databases": {
"cdd": {
"cd12549": "RNA recognition motif in vertebrate histone-lysine N-methyltransferase Setd1B (Set1B)"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR000504",
"name": "RNA recognition motif domain",
"type": "Domain",
"children": [
{
"accession": "IPR003954",
"name": "RNA recognition motif domain, eukaryotic-type",
"type": "Domain",
"children": [
{
"accession": "IPR034653",
"name": "SPF45, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034827",
"name": "TIA-1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034830",
"name": "TIA-1, RNA recognition motif 2",
"type": "Domain",
"children": []
}
]
},
{
"accession": "IPR007846",
"name": "RNA-recognition motif (RRM) Nup35-type domain",
"type": "Domain",
"children": []
},
{
"accession": "IPR014886",
"name": "La protein, xRRM domain",
"type": "Domain",
"children": [
{
"accession": "IPR034910",
"name": "LARP7, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR045537",
"name": "La-related protein 7 homolog, xRRM domain",
"type": "Domain",
"children": []
}
]
},
{
"accession": "IPR015047",
"name": "Synaptojanin-1/2, RNA recognition motif",
"type": "Domain",
"children": [
{
"accession": "IPR034971",
"name": "Synaptojanin-1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034973",
"name": "Synaptojanin-2, RNA recognition motif",
"type": "Domain",
"children": []
}
]
},
{
"accession": "IPR021790",
"name": "PTBP1-like, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR031766",
"name": "Occluded RNA-recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR033096",
"name": "Zinc finger protein 638, RNA recognition motif 1/2",
"type": "Domain",
"children": []
},
{
"accession": "IPR033107",
"name": "Eukaryotic translation initiation factor 4B, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR033110",
"name": "ROD1, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR033744",
"name": "RBM8, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034123",
"name": "RBM6, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034125",
"name": "RBM6, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034126",
"name": "RNA-binding protein Musashi homologue, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034131",
"name": "DAZ-associated protein 1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034134",
"name": "DAZ-associated protein 1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034138",
"name": "Nucleolar protein 8, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034140",
"name": "Ecto-NOX disulfide-thiol exchanger, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034143",
"name": "snRNP70, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034146",
"name": "snRNP35, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034147",
"name": "RBM40, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034148",
"name": "NCBP2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034150",
"name": "SF3B6, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034152",
"name": "SLIRP, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034156",
"name": "HRP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034158",
"name": "SF3B4, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034159",
"name": "SF3B4, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034166",
"name": "Npl3, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034167",
"name": "Nab3, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034168",
"name": "Peptidyl-prolyl cis-trans isomerase E, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034172",
"name": "SHARP, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034173",
"name": "SHARP, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034174",
"name": "SHARP, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034175",
"name": "SHARP, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034177",
"name": "PPARGC1B, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034181",
"name": "Pre-mRNA-splicing factor Cwc2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034186",
"name": "Pin4-like, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034189",
"name": "MARF1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034191",
"name": "MARF1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034192",
"name": "SREK1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034195",
"name": "Mrn1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034196",
"name": "CELF1/2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034198",
"name": "CELF1/2, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034199",
"name": "CELF1/2, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034200",
"name": "RDM1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034201",
"name": "RNPS1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034203",
"name": "RBM45, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034206",
"name": "RBM45, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034207",
"name": "RBM45, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034208",
"name": "RBM45, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034209",
"name": "PUF60, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034211",
"name": "PUF60, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034212",
"name": "PUF60, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034215",
"name": "RBM42, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034217",
"name": "SART3, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034218",
"name": "SART3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034219",
"name": "ZCRB1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034221",
"name": "RBM34, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034225",
"name": "Nop13/Rnp24, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034226",
"name": "Nop13/Rnp24, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034228",
"name": "Nop6, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034229",
"name": "eIF4H, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034230",
"name": "Nucleolin, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034233",
"name": "Nucleolin, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034234",
"name": "Nucleolin, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034235",
"name": "Nucleolin, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034237",
"name": "FOX1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034240",
"name": "eIF3G, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034244",
"name": "Rrt5, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034247",
"name": "Rrt5, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034254",
"name": "DNAJC17, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034256",
"name": "ALKBH8, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034257",
"name": "Acinus, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034261",
"name": "CNOT4, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034262",
"name": "TRMT2A, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034264",
"name": "RBM48, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034265",
"name": "MCM3AP, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034268",
"name": "RBM25, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034278",
"name": "RBM3/CIRBP, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034326",
"name": "ROD1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034349",
"name": "NUCL, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034350",
"name": "NUCL, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034351",
"name": "Nrp1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034352",
"name": "Rim4/Msa1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034353",
"name": "ABT1/ESF2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034356",
"name": "Slt11, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034357",
"name": "Yra1/Mlo3, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034358",
"name": "Vip1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034359",
"name": "MTHFSD, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034360",
"name": "Vip1-like, RNA recognition motif, plant",
"type": "Domain",
"children": []
},
{
"accession": "IPR034361",
"name": "PHIP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034362",
"name": "PHIP1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034363",
"name": "eIF3B, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034364",
"name": "PABP, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034365",
"name": "AtC3H46-like, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034366",
"name": "Protein xmas, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034369",
"name": "SCAF4, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034370",
"name": "SCAF8, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034371",
"name": "UHMK1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034374",
"name": "G3BP1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034376",
"name": "G3BP2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034388",
"name": "Star-PAP, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034396",
"name": "Yra2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034397",
"name": "Prp24, RNA recognition motif1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034398",
"name": "Prp24, RNA recognition motif2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034403",
"name": "Srp1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034404",
"name": "MSSP-1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034406",
"name": "RBMS3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034407",
"name": "U1 small nuclear ribonucleoprotein A, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034409",
"name": "U1 small nuclear ribonucleoprotein A, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034411",
"name": "Heterogeneous nuclear ribonucleoprotein R, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034414",
"name": "Dead end protein 1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034417",
"name": "Probable RNA-binding protein 19, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034418",
"name": "Probable RNA-binding protein 19, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034419",
"name": "Probable RNA-binding protein 19, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034420",
"name": "Probable RNA-binding protein 19, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034421",
"name": "Probable RNA-binding protein 19, RNA recognition motif 6",
"type": "Domain",
"children": []
},
{
"accession": "IPR034423",
"name": "Probable RNA-binding protein 19, RNA recognition motif 5",
"type": "Domain",
"children": []
},
{
"accession": "IPR034424",
"name": "GRSF-1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034425",
"name": "GRSF-1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034426",
"name": "GRSF-1, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034427",
"name": "ESRP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034434",
"name": "Probable RNA-binding protein 46, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034435",
"name": "Probable RNA-binding protein 46, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034440",
"name": "RNA-binding protein 47, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034445",
"name": "RNA-binding protein 47, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034447",
"name": "Serine/arginine-rich splicing factor 11, RRM",
"type": "Domain",
"children": []
},
{
"accession": "IPR034451",
"name": "RNA-binding protein 27, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034453",
"name": "MEI2-like, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034467",
"name": "Set1A, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034468",
"name": "Set1B, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034469",
"name": "Ribosome biogenesis protein 15, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034470",
"name": "RBM15, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034472",
"name": "RBM15, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034473",
"name": "RBM15, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034475",
"name": "RBM15B, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034482",
"name": "Mrd1, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034486",
"name": "hnRNP A2/B1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034492",
"name": "TIAR, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034494",
"name": "TIAR, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034496",
"name": "TIAR, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034500",
"name": "RBM7, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034501",
"name": "RBM11, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034502",
"name": "Raly, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034503",
"name": "SRSF9, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034506",
"name": "RBM14, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034507",
"name": "RBM14, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034510",
"name": "SECp43, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034511",
"name": "SRSF6, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034516",
"name": "hnRNP A1/3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034520",
"name": "SRSF1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034522",
"name": "PSP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034523",
"name": "PSP1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034525",
"name": "PSF, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034535",
"name": "RBM15B, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034536",
"name": "RBM15B, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034538",
"name": "ACF, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034540",
"name": "Prp24, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034544",
"name": "Heterogeneous nuclear ribonucleoprotein Q, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034548",
"name": "Heterogeneous nuclear ribonucleoprotein Q, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034552",
"name": "p54nrb, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034558",
"name": "p54nrb, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034562",
"name": "U2 small nuclear ribonucleoprotein B'', RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034564",
"name": "U2 small nuclear ribonucleoprotein B'', RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034588",
"name": "RBM12B, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034591",
"name": "RBM12, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034594",
"name": "RBM12, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034630",
"name": "MEF-2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034631",
"name": "MEF-2, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034633",
"name": "Ribonucleoprotein PTB-binding 1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034635",
"name": "Ribonucleoprotein PTB-binding 1, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034636",
"name": "Ribonucleoprotein PTB-binding 2, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034637",
"name": "Negative elongation factor E, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034648",
"name": "CELF-3/4/5/6, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034651",
"name": "SRSF7, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034769",
"name": "Cleavage and polyadenylation specificity factor subunit 6, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034773",
"name": "CPSF7, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034775",
"name": "Protein elav, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034777",
"name": "Nop12, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034781",
"name": "Scaffold attachment factor B1/2, RNA binding domain",
"type": "Domain",
"children": []
},
{
"accession": "IPR034784",
"name": "PDIP3, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034787",
"name": "RBPMS2, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034788",
"name": "Protein couch potato, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034790",
"name": "RBM20, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034792",
"name": "PTBPH1/PTBPH2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034793",
"name": "PTBPH1/PTBPH2, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034794",
"name": "PTBPH1/PTBPH2, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034795",
"name": "PTBPH3, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034796",
"name": "PTBPH3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034797",
"name": "PTBPH3, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034799",
"name": "PTBP2, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034800",
"name": "PTBP2, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034801",
"name": "hnRNP A0, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034805",
"name": "Nop4, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034806",
"name": "Nop4, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034808",
"name": "Nop4, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034809",
"name": "Nop4, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034816",
"name": "hnRNP-L, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034823",
"name": "CID8-like protein, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034825",
"name": "CID8-like protein, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034833",
"name": "PGC-1alpha, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034834",
"name": "PGC-1-related coactivator, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034837",
"name": "IGF2BP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034842",
"name": "IGF2BP1, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034843",
"name": "IGF2BP2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034845",
"name": "hnRNP A1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034846",
"name": "hnRNPAB, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034847",
"name": "hnRNP DL, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034854",
"name": "RBM12, RNA recognition motif 5",
"type": "Domain",
"children": []
},
{
"accession": "IPR034855",
"name": "RBM12, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034856",
"name": "RBM12, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR034858",
"name": "RBM12B, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034859",
"name": "RBM26, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034862",
"name": "Fungal Mei2-like, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034863",
"name": "Fungal Mei2-like, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034869",
"name": "EWS, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034878",
"name": "Plant La-related protein, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034880",
"name": "La-related protein 6, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034887",
"name": "LARP7, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034890",
"name": "Rrp7A, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034894",
"name": "Nrd1/Seb1, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034897",
"name": "RBM4, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034898",
"name": "RBM4, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034914",
"name": "HuB, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034915",
"name": "HuC, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034918",
"name": "HuD, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034927",
"name": "TNRC6C, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034928",
"name": "Matrin-3, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034930",
"name": "Matrin-3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034969",
"name": "hnRNPH3, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034970",
"name": "hnRNPH3, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034977",
"name": "CPEB-1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034980",
"name": "RNA-binding protein fusilli, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034983",
"name": "hnRPLL, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034985",
"name": "hnRPLL, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034986",
"name": "hnRPLL, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034988",
"name": "DAZ/BOULE, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR034990",
"name": "hnRNPM, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR034991",
"name": "RNA-binding protein 5, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR034992",
"name": "RNA-binding protein 10, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034993",
"name": "RNA-binding protein 5, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034995",
"name": "SRSF9, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034996",
"name": "HuR, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR034999",
"name": "HuB, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR035000",
"name": "PTBP1, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR035001",
"name": "PTBP1, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR035002",
"name": "PTBP2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR035005",
"name": "hnRNP-L, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR035008",
"name": "hnRNP-L, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR035009",
"name": "SR140, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR037551",
"name": "DAZ, RNA recognition motif, vertebrates",
"type": "Domain",
"children": []
},
{
"accession": "IPR039157",
"name": "RNA-binding protein 18, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR045305",
"name": "PABP, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR045844",
"name": "Ist3-like, RNA recognition motif",
"type": "Domain",
"children": []
},
{
"accession": "IPR047044",
"name": "RNA-binding protein 47, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR047188",
"name": "RNA-binding protein 12B, RNA recognition motif 4",
"type": "Domain",
"children": []
},
{
"accession": "IPR047189",
"name": "Nop12, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR047190",
"name": "Serine/arginine-rich splicing factor 4/6, RNA recognition motif 2",
"type": "Domain",
"children": []
},
{
"accession": "IPR047193",
"name": "FCA, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR047837",
"name": "Probable RNA-binding protein 46, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR047942",
"name": "Ribonucleoprotein PTB-binding 2, RNA recognition motif 3",
"type": "Domain",
"children": []
},
{
"accession": "IPR047943",
"name": "Ribonucleoprotein PTB-binding 2, RNA recognition motif 1",
"type": "Domain",
"children": []
},
{
"accession": "IPR048289",
"name": "NsCP33-like, RNA recognition motif 2",
"type": "Domain",
"children": []
}
]
},
"name": {
"name": "Set1B, RNA recognition motif",
"short": "Set1B_RRM"
},
"description": [
{
"text": "<p>This entry represents the RNA recognition motif (RRM) of Setd1B (also known as Set1B), a ubiquitously expressed vertebrates histone methyltransferase that exhibits high homology to yeast Set1. Set1B is localised to euchromatic nuclear speckles and associates with a complex containing six human homologues of the yeast Set1/COMPASS complex, including CXXC finger protein 1 (CFP1; homologous to yeast Spp1), Rbbp5 (homologous to yeast Swd1), Ash2 (homologous to yeast Bre2), Wdr5 (homologous to yeast Swd3), and Wdr82 (homologous to yeast Swd2). Set1B complex is a histone methyltransferase that produces trimethylated histone H3 at Lys4 [[cite:PUB00083589], [cite:PUB00100811]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00083589": {
"PMID": 17355966,
"ISBN": null,
"volume": "282",
"issue": "18",
"year": 2007,
"title": "Identification and characterization of the human Set1B histone H3-Lys4 methyltransferase complex.",
"URL": null,
"raw_pages": "13419-28",
"medline_journal": "J Biol Chem",
"ISO_journal": "J. Biol. Chem.",
"authors": [
"Lee JH",
"Tate CM",
"You JS",
"Skalnik DG."
],
"DOI_URL": "http://dx.doi.org/10.1074/jbc.M609809200"
},
"PUB00100811": {
"PMID": 25561738,
"ISBN": null,
"volume": "290",
"issue": "10",
"year": 2015,
"title": "Biochemical reconstitution and phylogenetic comparison of human SET1 family core complexes involved in histone methylation.",
"URL": null,
"raw_pages": "6361-75",
"medline_journal": "J Biol Chem",
"ISO_journal": "J Biol Chem",
"authors": [
"Shinsky SA",
"Monteith KE",
"Viggiano S",
"Cosgrove MS."
],
"DOI_URL": null
}
},
"set_info": null,
"overlaps_with": [
{
"accession": "IPR035979",
"name": "RNA-binding domain superfamily",
"type": "homologous_superfamily"
},
{
"accession": "IPR012677",
"name": "Nucleotide-binding alpha-beta plait domain superfamily",
"type": "homologous_superfamily"
}
],
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 525,
"pathways": 8,
"proteins": 525,
"proteomes": 288,
"sets": 0,
"structural_models": {
"alphafold": 25,
"bfvd": 0
},
"structures": 0,
"taxa": 1028
},
"entry_annotations": {},
"cross_references": {
"ec": {
"displayName": "ENZYME",
"description": "ENZYME is a repository of information relative to the nomenclature of enzymes. It is primarily based on the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB) and it describes each type of characterized enzyme for which an EC (Enzyme Commission) number has been provided.",
"rank": 19,
"accessions": [
{
"accession": "2.1.1.354",
"url": "https://enzyme.expasy.org/EC/2.1.1.354"
}
]
}
},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}
