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InterPro-Version: 108.0
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{
"metadata": {
"accession": "IPR016455",
"entry_id": null,
"type": "family",
"go_terms": [
{
"identifier": "GO:0016762",
"name": "xyloglucan:xyloglucosyl transferase activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0010411",
"name": "xyloglucan metabolic process",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0042546",
"name": "cell wall biogenesis",
"category": {
"code": "P",
"name": "biological_process"
}
}
],
"source_database": "interpro",
"member_databases": {
"cdd": {
"cd02176": "Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16"
},
"pirsf": {
"PIRSF005604": "Xyloglucan endotransglucosylase/hydrolase"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR044791",
"name": "Beta-glucanase/XTH",
"type": "Family",
"children": [
{
"accession": "IPR008264",
"name": "Beta-glucanase",
"type": "Family",
"children": []
},
{
"accession": "IPR016455",
"name": "Xyloglucan endotransglucosylase/hydrolase",
"type": "Family",
"children": []
}
]
},
"name": {
"name": "Xyloglucan endotransglucosylase/hydrolase",
"short": "XTH"
},
"description": [
{
"text": "<p>This entry includes a group of xyloglucan endotransglucosylase/hydrolases (XTHs) from plants [[cite:PUB00074925]]. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. XTHs catalyses xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET) and are involved in the modification of cell wall structure by cleaving and, often, also re-joining xyloglucan molecules in primary plant cell walls [[cite:PUB00074924]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00074925": {
"PMID": 20421457,
"ISBN": null,
"volume": "153",
"issue": "2",
"year": 2010,
"title": "The XTH gene family: an update on enzyme structure, function, and phylogeny in xyloglucan remodeling.",
"URL": null,
"raw_pages": "456-66",
"medline_journal": "Plant Physiol",
"ISO_journal": "Plant Physiol.",
"authors": [
"Eklof JM",
"Brumer H."
],
"DOI_URL": "http://dx.doi.org/10.1104/pp.110.156844"
},
"PUB00074924": {
"PMID": 12856951,
"ISBN": null,
"volume": "52",
"issue": "2",
"year": 2003,
"title": "Active gene expression of a xyloglucan endotransglucosylase/hydrolase gene, XTH9, in inflorescence apices is related to cell elongation in Arabidopsis thaliana.",
"URL": null,
"raw_pages": "473-82",
"medline_journal": "Plant Mol Biol",
"ISO_journal": "Plant Mol. Biol.",
"authors": [
"Hyodo H",
"Yamakawa S",
"Takeda Y",
"Tsuduki M",
"Yokota A",
"Nishitani K",
"Kohchi T."
],
"DOI_URL": "http://dx.doi.org/10.1023/A:1023904217641"
}
},
"set_info": null,
"overlaps_with": [
{
"accession": "IPR013320",
"name": "Concanavalin A-like lectin/glucanase domain superfamily",
"type": "homologous_superfamily"
}
],
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 14901,
"pathways": 0,
"proteins": 14809,
"proteomes": 366,
"sets": 0,
"structural_models": {
"alphafold": 12942,
"bfvd": 0
},
"structures": 6,
"taxa": 1209
},
"entry_annotations": {},
"cross_references": {
"ec": {
"displayName": "ENZYME",
"description": "ENZYME is a repository of information relative to the nomenclature of enzymes. It is primarily based on the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB) and it describes each type of characterized enzyme for which an EC (Enzyme Commission) number has been provided.",
"rank": 19,
"accessions": [
{
"accession": "2.4.1.207",
"url": "https://enzyme.expasy.org/EC/2.4.1.207"
}
]
}
},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "1umz",
"name": "Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG."
}
}
}
