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InterPro-Version: 108.0
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{
"metadata": {
"accession": "IPR003567",
"entry_id": null,
"type": "family",
"go_terms": [
{
"identifier": "GO:0015232",
"name": "heme transmembrane transporter activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0015886",
"name": "heme transport",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0017004",
"name": "cytochrome complex assembly",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0016020",
"name": "membrane",
"category": {
"code": "C",
"name": "cellular_component"
}
}
],
"source_database": "interpro",
"member_databases": {
"panther": {
"PTHR43653": "CYTOCHROME C ASSEMBLY PROTEIN-RELATED"
},
"prints": {
"PR01410": "CCBIOGENESIS"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR003567",
"name": "Cytochrome c-type biogenesis protein",
"type": "Family",
"children": [
{
"accession": "IPR003568",
"name": "Cytochrome c-type biogenesis protein CcmF",
"type": "Family",
"children": [
{
"accession": "IPR003570",
"name": "Cytochrome c-type biogenesis protein NrfE",
"type": "Family",
"children": []
},
{
"accession": "IPR017563",
"name": "Cytochrome c nitrate reductase biogenesis protein NrfE",
"type": "Family",
"children": []
}
]
},
{
"accession": "IPR003569",
"name": "Probable cytochrome c biosynthesis protein, plants",
"type": "Family",
"children": []
}
]
},
"name": {
"name": "Cytochrome c-type biogenesis protein",
"short": "Cyt_c_biogenesis"
},
"description": [
{
"text": "<p>Within mitochondria and bacteria, a family of related proteins is involved in the assembly of periplasmic c-type cytochromes: these include CycK [[cite:PUB00002276]], CcmF [[cite:PUB00002274], [cite:PUB00003599]], NrfE [[cite:PUB00006649]] and CcbS [[cite:PUB00006642]]. These proteins may play a role in guidance of apocytochromes and haem groups for their covalent linkage by the cytochrome-c-haem lyase. Members of the family are probably integral membrane proteins, with up to 16 predicted transmembrane (TM) helices.</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00002276": {
"PMID": 7665469,
"ISBN": null,
"volume": "177",
"issue": "17",
"year": 1995,
"title": "Characterization of the cycHJKL genes involved in cytochrome c biogenesis and symbiotic nitrogen fixation in Rhizobium leguminosarum.",
"URL": null,
"raw_pages": "4927-34",
"medline_journal": "J Bacteriol",
"ISO_journal": "J. Bacteriol.",
"authors": [
"Delgado MJ",
"Yeoman KH",
"Wu G",
"Vargas C",
"Davies AE",
"Poole RK",
"Johnston AW",
"Downie JA."
],
"DOI_URL": "http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=7665469&action=stream&blobtype=pdf"
},
"PUB00002274": {
"PMID": 7635817,
"ISBN": null,
"volume": "177",
"issue": "15",
"year": 1995,
"title": "Escherichia coli genes required for cytochrome c maturation.",
"URL": null,
"raw_pages": "4321-6",
"medline_journal": "J Bacteriol",
"ISO_journal": "J. Bacteriol.",
"authors": [
"Thony-Meyer L",
"Fischer F",
"Kunzler P",
"Ritz D",
"Hennecke H."
],
"DOI_URL": "http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=7635817&action=stream&blobtype=pdf"
},
"PUB00003599": {
"PMID": 9043133,
"ISBN": null,
"volume": "143 ( Pt 2)",
"issue": null,
"year": 1997,
"title": "The Paracoccus denitrificans ccmA, B and C genes: cloning and sequencing, and analysis of the potential of their products to form a haem or apo- c-type cytochrome transporter.",
"URL": null,
"raw_pages": "563-76",
"medline_journal": "Microbiology",
"ISO_journal": "Microbiology (Reading, Engl.)",
"authors": [
"Page MD",
"Pearce DA",
"Norris HA",
"Ferguson SJ."
],
"DOI_URL": null
},
"PUB00006649": {
"PMID": 8057835,
"ISBN": null,
"volume": "12",
"issue": "1",
"year": 1994,
"title": "A seven-gene operon essential for formate-dependent nitrite reduction to ammonia by enteric bacteria.",
"URL": null,
"raw_pages": "153-63",
"medline_journal": "Mol Microbiol",
"ISO_journal": "Mol. Microbiol.",
"authors": [
"Hussain H",
"Grove J",
"Griffiths L",
"Busby S",
"Cole J."
],
"DOI_URL": "http://dx.doi.org/10.1111/j.1365-2958.1994.tb01004.x"
},
"PUB00006642": {
"PMID": 8389979,
"ISBN": null,
"volume": "239",
"issue": "1-2",
"year": 1993,
"title": "A plant mitochondrial gene encodes a protein involved in cytochrome c biogenesis.",
"URL": null,
"raw_pages": "49-57",
"medline_journal": "Mol Gen Genet",
"ISO_journal": "Mol. Gen. Genet.",
"authors": [
"Schuster W",
"Combettes B",
"Flieger K",
"Brennicke A."
],
"DOI_URL": null
}
},
"set_info": null,
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 53695,
"pathways": 0,
"proteins": 15646,
"proteomes": 7100,
"sets": 0,
"structural_models": {
"alphafold": 12873,
"bfvd": 0
},
"structures": 1,
"taxa": 14114
},
"entry_annotations": {},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}
