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InterPro-Version: 108.0
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{
"metadata": {
"accession": "IPR001742",
"entry_id": null,
"type": "family",
"go_terms": [
{
"identifier": "GO:0005198",
"name": "structural molecule activity",
"category": {
"code": "F",
"name": "molecular_function"
}
}
],
"source_database": "interpro",
"member_databases": {
"pfam": {
"PF00898": "Orbivirus outer capsid protein VP2"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR001742",
"name": "Outer capsid protein VP2, Orbivirus",
"type": "Family",
"children": []
},
"name": {
"name": "Outer capsid protein VP2, Orbivirus",
"short": "Capsid_VP2_Orbivir"
},
"description": [
{
"text": "<p>This family contains the outer capsid, VP2 proteins from the orbiviruses; these are dsRNA viruses belonging to the Reoviridae. VP2 acts as an anchor for VP1 and VP3 and contains a non-specific DNA and RNA binding domain in the N terminus [[cite:PUB00003536], [cite:PUB00005622]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00003536": {
"PMID": 9311813,
"ISBN": null,
"volume": "71",
"issue": "10",
"year": 1997,
"title": "Three-dimensional structural analysis of recombinant rotavirus-like particles with intact and amino-terminal-deleted VP2: implications for the architecture of the VP2 capsid layer.",
"URL": null,
"raw_pages": "7353-60",
"medline_journal": "J Virol",
"ISO_journal": "J. Virol.",
"authors": [
"Lawton JA",
"Zeng CQ",
"Mukherjee SK",
"Cohen J",
"Estes MK",
"Prasad BV."
],
"DOI_URL": "http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=9311813&action=stream&blobtype=pdf"
},
"PUB00005622": {
"PMID": 9281498,
"ISBN": null,
"volume": "235",
"issue": "2",
"year": 1997,
"title": "Structure of Broadhaven virus by cryoelectron microscopy: correlation of structural and antigenic properties of Broadhaven virus and bluetongue virus outer capsid proteins.",
"URL": null,
"raw_pages": "191-200",
"medline_journal": "Virology",
"ISO_journal": "Virology",
"authors": [
"Schoehn G",
"Moss SR",
"Nuttall PA",
"Hewat EA."
],
"DOI_URL": "http://dx.doi.org/10.1006/viro.1997.8685"
}
},
"set_info": null,
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 2,
"interactions": 0,
"matches": 1586,
"pathways": 0,
"proteins": 1569,
"proteomes": 12,
"sets": 0,
"structural_models": {
"alphafold": 0,
"bfvd": 70
},
"structures": 3,
"taxa": 111
},
"entry_annotations": {
"alignment:seed": 25,
"alignment:full": 23
},
"cross_references": {
"gp": {
"displayName": "Genome Properties",
"description": "Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.",
"rank": 45,
"accessions": [
{
"accession": "GenProp1006",
"url": "https://www.ebi.ac.uk/interpro/genomeproperties/genome-property/GenProp1006"
}
]
}
},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}