Cellular Phenotype Database homepage

Cellular Phenotype Database


Reagent summary

Reagent information:
CellPh DB internal ID:
AMBN10049790
Supplier:
Ambion, Silencer Pre-designed siRNA
Supplier reagent ID:
247684
Sequence:
  UGUUGGCCAGGCUGGUCUCTT
GTACAACCGGUCCGACCAGAG
Target gene:
TRNAU1AP
Ensembl ID:
ENSG00000180098
Gene Ontology:
show
Transcript Hit/Total transcripts: (?)
This ratio represents the number of transcripts of the target gene that are mapped by the reagent over the total number of transcripts produced by the target gene
1 / 10
Match:
exact
Phenotypes observed:
no phenotype was assigned to this reagent
Alignment information:
Mapping to transcripts of TRNAU1AP:
    for coding transcript, and   °    for non-coding transcript
regions of reagent's mapping to exons are coloured with dark blue and indicated with red
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And there are also 1129 genes targeted by this reagent:

AACS, AAED1, AAK1, ABAT, ABCB5, ABCC10, ABCC6, ABCG1, ABHD11, ABL2, ABO, AC005086.1, AC069542.1, AC104623.1, ACBD7, ACOT13, ACP6, ACSS2, ADAMTS4, ADAR, ADCY2, ADCY7, ADIPOQ, ADRBK1, AGMAT, AGO3, AICDA, AKNAD1, AKT2, ALKBH6, ALMS1, AMD1, AMER2, AMT, ANAPC16, ANGPT4, ANKFY1, ANKH, ANKLE2, ANKRD40, ANKRD45, ANKS1B, ANKS4B, ANKZF1, AOAH, AP000347.2, AP006285.3, AP1M1, AP3M1, APP, ARHGAP44, ARID3B, ARL17A, ARL17B, ARL2-SNX15, ARMC9, ARPP19, ARSB, ARSG, ASB16, ASCC1, ASGR2, ASPA, ATAD2, ATG12, ATG2A, ATL3, ATM, ATP1B4, ATP5A1, ATP5D, ATP6V0A2, ATP6V1H, ATXN3, AVIL, AVL9, BBIP1, BCAS4, BCL2L15, BCL7A, BEND2, BEST1, BLMH, BLOC1S2, BMP7, BMPR1A, BOLA3, BP-21201H5.1, BRD8, BRF1, BRI3, BRIP1, BROX, BTBD7, BUD31, C11ORF31, C12ORF43, C12ORF65, C12ORF76, C15ORF40, C15ORF57, C16ORF87, C17ORF99, C18ORF25, C19ORF25, C19ORF54, C1ORF106, C1ORF61, C22ORF39, C22ORF46, C2ORF83, C3ORF62, C3, C4BPB, C4ORF26, C5AR2, C5ORF28, C5ORF45, C6ORF141, C9ORF117, C9ORF3, C9ORF85, CA14, CA5A, CA5B, CALCOCO2, CAMKK2, CAPN7, CAPNS1, CAPS, CARD8, CATIP, CCAR1, CCDC113, CCDC117, CCDC127, CCDC150, CCDC159, CCDC30, CCDC50, CCDC57, CCDC66, CCDC69, CCDC79, CCL16, CCL22, CCL5, CCND3, CCNDBP1, CCR4, CCR6, CCR6, CD276, CD3G, CD68, CDC14B, CDH10, CDK12, CDKL5, CEACAM19, CEACAM22P, CEBPZOS, CECR2, CELA2A, CELP, CEP104, CEP41, CEP57, CEP78, CEP83, CEP97, CERCAM, CFL2, CFLAR, CHAF1B, CHCHD5, CHDH, CHGB, CHM, CHORDC1, CHP1, CHPT1, CHST6, CIDECP, CIITA, CLN6, CLN8, CLTA, CLUAP1, CMBL, CNIH4, CNN2, CNN3, CNNM1, CNP, CNTNAP1, COA1, COA5, COL6A3, COL8A1, COLGALT1, COPS2, COQ10A, COQ6, COQ7, CORO7, COX18, CPSF2, CPT1C, CREBBP, CREBRF, CRLF2, CRTAP, CRX, CRYZL1, CSNK1E, CSNK1G1, CSPG4P12, CS, CTC-539A10.7, CTD-3088G3.8, CWF19L1, CXORF23, CXORF38, CXORF56, CYB561A3, CYP3A43, CYP4F8, CYTH2, DAP3, DAPK2, DBP, DBT, DCAF11, DCDC2, DCUN1D2, DDA1, DDB2, DDIAS, DDX11, DDX23, DDX52, DENND2C, DENND3, DGKE, DGKZ, DHODH, DIEXF, DIP2A, DIS3, DLK2, DMBT1P1, DMWD, DNAAF1, DNAJB6, DNAJC14, DNAJC24, DNAJC7, DNASE2, DNM1P46, DOCK6, DOT1L, DPH5, DPY19L4, DRAXIN, DUOX1, DYNLT1, E2F5, ECHDC1, EDRF1, EEF2K, EFCAB11, EHD2, EIF1AD, EIF2AK2, EIF3G, EIF3L, EIF4A3, EIF4E, ELAVL1, ELMOD3, ELOVL6, ELP2, ELP4, EMC4, EML6, ENAH, ENTPD1, EOGT, EPB42, EPC1, EPHA10, EPN1, ERBB3, ERCC3, ERCC4, ERN2, ERP29, ESRRG, ESYT2, ETFDH, ETS1, EVI5L, EXD1, EXOC7, EXOSC10, EXOSC1, FAM101B, FAM126B, FAM129A, FAM129C, FAM131A, FAM134A, FAM134C, FAM135A, FAM153A, FAM162A, FAM175A, FAM177A1, FAM210B, FAM219B, FAM21EP, FAM63B, FAM71F2, FAM84B, FAM98C, FAM9B, FAT3, FBLN7, FBXO11, FBXO18, FBXO38, FBXO42, FBXO45, FCAR, FEM1A, FEZ1, FGD4, FGFR1OP2, FGFR1OP, FGGY, FKBP11, FLAD1, FLCN, FLJ42102, FLT3LG, FLYWCH1, FMO3, FN3K, FRMD4B, FRS3, FXR2, FYTTD1, G3BP1, G6PC, GABRG3, GALNT6, GALNT9, GAPVD1, GAREML, GART, GATAD1, GDPGP1, GFOD2, GGA2, GGCX, GIPR, GJC1, GLOD4, GLTP, GMEB1, GNL3L, GON4L, GPATCH2L, GPATCH2, GPN2, GPR125, GPR157, GRHL1, GRWD1, GSDMD, GSE1, GSN, GSPT1, GSTTP2, GSTZ1, GTF2H2B, GTF2H2C, GTF2H2, GTF2H5, GTF2IRD2B, GTF2IRD2P1, GTF2IRD2, GTPBP4, GUCD1, GUSBP5, H6PD, HAMP, HAP1, HARS, HAUS2, HCAR1, HDGFRP2, HDGFRP3, HEATR5A, HELB, HELLS, HEMK1, HERC2P3, HERC4, HERPUD1, HFE, HINFP, HMCN2, HMGA2, HNRNPA1P54, HNRNPUL1, HOOK2, HOOK3, HOPX, HPS5, HSD11B1L, HSD17B1, HSH2D, HSPA4L, HSPB11, HTR7P1, HUS1, HYPK, IAH1, IARS, IBTK, ICA1L, ICE2, ICMT, IDH2, IFFO1, IFNAR2, IFNLR1, IFT172, IFT22, IFT80, IFT81, IGSF6, IMPA2, INIP, INPP5B, INTS6, INTS8, IPO5P1, IPO5, IRF1, ISG20, ITGA2B, ITGA3, ITGB8, ITPKB, ITPRIPL2, IYD, JAM2, KANK1, KANK2, KCNE3, KCTD19, KCTD20, KDELC2, KDM2B, KDSR, KIAA1324, KIAA1751, KIAA1958, KIF19, KIF1B, KIF3A, KLB, KLF8, KLHL18, KLHL28, KLHL36, KLRD1, KPNA1, KREMEN1, L2HGDH, L3MBTL2, LACTB, LAMP2, LAT2, LCA5L, LCTL, LDLR, LIAS, LIPT1, LMNTD1, LMOD3, LONP2, LPO, LRCH3, LRFN3, LRPAP1, LRRC19, LRRC25, LRRC3, LRRC57, LRRC58, LRRC69, LRRN2, LRTOMT, LRWD1, LSM12, LSM3, LTB4R, LTBP4, LUZP2, LY6G5B, LY6G5B, LY6G5C, LY75, LYRM2, LZIC, MAEA, MAEL, MAGEA10, MAP1LC3C, MAP1S, MAP2K7, MAP3K13, MAP4K1, MAP7D3, MAPK3, MAPT, MARCH6, MARCH9, MAS1, MAST1, MAVS, MCCC1, MCC, MCM3AP, MCPH1, MCUR1, MDM2, ME2, MED11, MEF2A, MEFV, MESDC2, METTL14, METTL16, METTL20, METTL22, METTL3, METTL6, MFSD11, MICAL3, MIEF1, MILR1, MITD1, MLLT6, MLXIPL, MLXIP, MOB1B, MOB3A, MOBP, MOK, MPHOSPH10, MPHOSPH8, MPP5, MPPE1, MRE11A, MRI1, MRO, MRPL42, MRPL49, MRPS11, MRPS15, MTBP, MTHFD1, MTHFR, MTRF1, MUM1, MXRA7, MYH7B, MYO10, MYO1F, MYO1G, MYO5A, MYO6, MYOM1, MZB1, MZT2A, N4BP2L2, NAA15, NAA30, NAA35, NACA, NAGPA, NALCN, NANOS1, NAP1L1, NARF, NCAPH2, NCCRP1, NCKAP1, NCMAP, NCOA6, NDRG3, NDUFA2, NDUFB1, NDUFV3, NEIL3, NEU1, NFAM1, NFASC, NFKBIB, NFKBID, NFYB, NGLY1, NGRN, NIP7, NIPBL, NLRC3, NLRP12, NMUR1, NOL12, NOM1, NPHP3, NPHS1, NPLOC4, NQO1, NR5A2, NSUN5P1, NT5C3B, NT5DC3, NTAN1, NTN5, NUCB2, NUDT19, NUDT21, NUDT22, NUP107, NUP62, NUPR1, NXN, OAZ2, OCEL1, OLA1P3, OPA3, OPTN, ORAI2, ORC2, ORC6, OSBPL10, OTUD6A, OTUD7B, OTULIN, OXA1L, P2RX4, P2RX5, P2RX7, PADI4, PAICS, PANO, PAPLN, PAPOLG, PARVB, PAXIP1, PCDHA10, PCNXL4, PCSK6, PCYOX1, PCYT1B, PDDC1, PDE4C, PDLIM2, PDZD2, PEAK1, PER2, PEX26, PFKL, PGBD4, PGLS, PHACTR2, PHLDB1, PIDD1, PIGP, PIK3C2A, PILRB, PIN1, PITPNM1, PKD1L2, PLBD2, PLCD3, PLCXD1, PLEKHB2, PLEKHG1, PLEKHG4B, PLEKHH1, PLLP, PLOD1, PLOD3, PM20D2, PNMA2, PNPT1, POC1B, POLE, POLG2, POLH, POLR2C, POLR3D, POM121, POU2AF1, POU5F1B, POU5F2, PPA1, PPAP2C, PPARA, PPIP5K2, PPM1K, PPP1R13L, PPP1R15A, PPP4C, PPP5D1, PQLC2, PRIM1, PRKAA1, PRKAG2, PRKX, PRKY, PRND, PRPF38A, PRPSAP1, PRR11, PRR23C, PRRG4, PSMA6, PSMB6, PSMB9, PSMD11, PSMD13, PSMD9, PSPN, PTBP2, PTGES3L, PTGES3, PTPLB, PTPN14, PTPN7, PTRH1, PURB, PXMP4, PYROXD1, QPRT, R3HDM1, RAB11FIP1, RAB11FIP4, RAB21, RAB42, RAB8A, RABGAP1L, RABL2A, RABL2B, RAD9A, RASGRP3, RASL10B, RASSF6, RBBP9, RBM22P2, RBM23, RBM34, RBM47, RBMS2, RCSD1, REL, RFTN2, RGPD5, RGS12, RHBDD3, RHNO1, RILPL1, RILPL2, RIN1, RNF115, RNF141, RNF165, RNF207, RNF7, RNF8, RNFT2, RP11-193H22.2, RP11-208P4.1, RP11-260N14.1, RP11-307A17.2, RP11-365F18.3, RP11-423H2.1, RP11-44M6.3, RP11-54C4.3, RP11-74M13.4, RP11-809N15.3, RPAP1, RPGRIP1L, RPL29P25, RPL37, RPL38, RPLP0P2, RPS15A, RPS2P45, RPS6KA3, RPS6KA5, RPS6KB2, RPS8, RRN3P1, RRP7A, RRP8, RUFY3, SAG, SAMD5, SARNP, SASH1, SCAF11, SCAMP4, SCFD1, SCIN, SCN3B, SCO1, SDHC, SDR42E1, SEC14L1, SEC14L6, SEC1P, SEC22A, SEC31A, SEPT2, SEPT7P2, SEPT9, SEPW1, SERF1A, SERF1B, SERINC5, SERPINB5, SETD5, SETD7, SF3B2, SFT2D2, SFXN1, SGK494, SGSM1, SGTB, SH2B1, SH2B3, SH2D3A, SH3BP2, SH3GLB1, SHE, SHFM1, SHISA9, SHOX, SIKE1, SIPA1L3, SIVA1, SLC11A1, SLC11A2, SLC12A8, SLC15A2, SLC15A4, SLC24A4, SLC25A33, SLC25A37, SLC2A14, SLC33A1, SLC35E1, SLC35E2B, SLC35E3, SLC35F6, SLC36A2, SLC39A3, SLC39A4, SLC44A4, SLC48A1, SLC4A1, SLC4A8, SLC5A5, SLC6A11, SLC6A4, SLCO3A1, SLX1A-SULT1A3, SLX1A, SLX1B, SMARCA4, SMARCC2, SMG9, SMIM11, SMIM11, SMIM14, SMIM7, SMN1, SMN2, SMU1, SMUG1, SNAPC3, SNF8, SNRNP200, SNRNP35, SNTB2, SNX15, SNX4, SORL1, SPATA21, SPG21, SPINK1, SPIRE2, SPPL2B, SPPL3, SPTY2D1, SRCIN1, SRD5A3, SRGAP1, SS18, SSH2, SSTR2, ST18, ST3GAL2, STARD7, STK25, STK3, STMND1, STRBP, STT3B, STX1B, STYX, SUGP2, SULT2B1, SUOX, SV2A, SVOP, SYDE2, SYNE1, SYNE3, SYNRG, SYT11, SYT17, SYTL1, TAF6, TANGO2, TAOK3, TARBP1, TATDN3, TBC1D10A, TBC1D15, TBCK, TCF25, TCF7, TCOF1, TCTN1, THAP6, THOC3, THUMPD3, TIGD5, TIMM44, TIMM50, TINF2, TIPIN, TLE2, TLR6, TM2D2, TMC8, TMCO6, TMED5, TMEM105, TMEM116, TMEM14B, TMEM154, TMEM168, TMEM185A, TMEM189, TMEM19, TMEM236, TMEM50B, TMEM5, TMPO, TNFRSF1B, TNK2, TOX4, TPH1, TPM3, TPP2, TPT1, TRAF3IP2, TRAPPC4, TRDMT1, TRIM33, TRIM34, TRIM45, TRIM69, TRIOBP, TRMT2B, TRPM3, TRPM6, TRPM8, TRPV1, TRPV1, TRPV3, TSC2, TSPAN31, TSPAN5, TTC28, TTC39C, TTPAL, TUBD1, TUBGCP5, TUBGCP6, TXNDC15, TXNL4A, TYRO3, UBE2I, UBE2Q2P1, UBE2S, UBE2V2, UBOX5, UBR2, UEVLD, UNC13A, UQCRB, UQCRHL, USF2, USP49, USP6NL, USP8, USP9Y, UTP20, VCL, VDAC1, VGLL4, VHL, VN1R1, VPS28, VPS33A, VPS4B, VPS53, VPS8, VPS9D1, VSIG1, VTI1A, WBP2, WDFY2, WDR11, WDR54, WDR59, WDR66, WDR75, WDR76, WDR91, WDR92, WDR92, WISP3, WNT9B, WTIP, XAF1, XIAP, XRCC2, YBX3, YIPF4, YIPF6, YME1L1, YTHDC1, ZAK, ZBED1, ZBED5, ZBTB25, ZBTB3, ZC3H12D, ZC3H14, ZCCHC4, ZEB2, ZFP14, ZFYVE16, ZFYVE20, ZFYVE21, ZGRF1, ZKSCAN1, ZNF101, ZNF121, ZNF133, ZNF141, ZNF154, ZNF157, ZNF169, ZNF200, ZNF207, ZNF213, ZNF224, ZNF230, ZNF250, ZNF264, ZNF268, ZNF273, ZNF274, ZNF331, ZNF341, ZNF383, ZNF385C, ZNF3, ZNF445, ZNF492, ZNF506, ZNF532, ZNF554, ZNF557, ZNF566, ZNF576, ZNF587, ZNF605, ZNF619, ZNF670, ZNF709, ZNF709, ZNF713, ZNF714, ZNF716, ZNF720, ZNF726, ZNF774, ZNF785, ZNF788, ZNF7, ZNF814, ZNF83, ZNF8, ZSCAN12, ZSWIM8