IHECRE00004698.2 PREVIOUS JSON
| Species | Homo sapiens |
| Type | Single donor |
| Status | Partial |
| Project | ENCODE |
| Description | Reference epigenome for human Caco-2 cell line |
| Live version | IHECRE00004698.6 |
| Previous versions | IHECRE00004698.1 |
Metadata
| Biomaterial type | Cell Line |
| Disease ontology uri | https://ncit.nci.nih.gov/ncitbrowser/pages/multiple_search.jsf?nav_type=terminologies |
| Differentiation stage | unknown |
| Differentiation method | unknown |
| Passage | unknown |
| Medium | unknown |
| Line | Caco-2 |
| Taxon id | 9606 |
| Sex | Male |
| Disease | Colorectal adenocarcinoma |
| Sample ontology uri | http://purl.obolibrary.org/obo/EFO:0001099 |
| Lineage | endoderm |
| Batch | unknown |
| Biomaterial provider | American Type Culture Collection (ATCC) |
Experimental data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | ChIP-Seq Input: Transcription factor CTCF | ENCODE | ENCSR000DQN | None | https://www.encodeproject.org/experiments/ENCSR000DQN |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR000DQJ | None | https://www.encodeproject.org/experiments/ENCSR000DQJ |
| ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR000DQL | None | https://www.encodeproject.org/experiments/ENCSR000DQL |
| ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR000DQK | None | https://www.encodeproject.org/experiments/ENCSR000DQK |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR000DQM | None | https://www.encodeproject.org/experiments/ENCSR000DQM |
| DNase-Hypersensitivity | Chromatin Accessibility | ENCODE | ENCSR000EMI | None | https://www.encodeproject.org/experiments/ENCSR000EMI |