IHECRE00001880.4 LIVE IHEC harmonized v2.0 JSON  

Species Homo sapiens
Type Single donor
Status Complete
Project AMED-CREST
Description Hepatitis C virus-positive human hepatocytes purified from partial hepatectomy speimens
Previous versions IHECRE00001880.3   IHECRE00001880.2   IHECRE00001880.1  

Metadata


Biomaterial type primary cell
Cell type hepatocyte
Tissue type liver
Biospecimen
    Broad label liver
    Intermediate label hepatocyte
    Curated label Hepatocyte
    Ontology curie CL:0000182
Biospecimen disease
    Broad label Healthy/None
    Ontology curie NCIM:C0549184
Donor
    Type Single donor
    ID HPC8
    Age 70-79
    Age unit year
    Life stage adult
    Sex male
    Health status Liver carcinoma
    Health status ontology curie NCIM:C2239176

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
Bisulfite-Seq DNA Methylation JGA JGAR000006929 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000026
ChIP-Seq Histone H3K4me1 JGA JGAR000006962 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq Histone H3K4me3 JGA JGAR000006963 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq Histone H3K27Ac JGA JGAR000006964 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq Histone H3K27me3 JGA JGAR000006965 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq Histone H3K36me3 JGA JGAR000006966 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq Histone H3K9me3 JGA JGAR000006967 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
ChIP-Seq ChIP-Seq Input JGA JGAR000006968 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000027
RNA-Seq mRNA-Seq JGA JGAR000007012 None https://ddbj.nig.ac.jp/resource/jga-dataset/JGAD000028