IHECRE00000225.1 PREVIOUS JSON  

Species Homo sapiens
Type Single donor
Status Complete
Project CEEHRC
Description Cell Line:184-hTert-L9 (CEMT_8, Mammary gland-Breast)
Live version IHECRE00000225.4

Metadata


Biomaterial type Cell Line
Taxon id 9606
Differentiation stage NA
Passage 11
Differentiation method NA
Disease None
Sex Female
Lineage Normal mammary epithelial cell line. L2 and L9 are two clones selected from the original 184-hTERT line, which was a mixed population. 184-hTERTs are predisposed to gain chromosome 20 upon continued passage in culture. The L2 clone gains chromosome 20 much more rapidly than L9 or other clones that have been examined.
Batch 1
Ihec reference epigenome identifier CEMT0008
Medium Growth media: MEBM+MEGM (supplements and growth factors, note: GA1000 also included as part of the supplements was NOT used in the growth media) all from LONZA
Biomaterial provider Aparicio
Line 184-hTert-L9

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq Histone H3K4me1 EGA EGAX00001172078 EGAD00001001406 https://ega-archive.org/datasets/EGAD00001001406
ChIP-Seq Histone H3K4me3 EGA EGAX00001172079 EGAD00001001407 https://ega-archive.org/datasets/EGAD00001001407
ChIP-Seq Histone H3K9me3 EGA EGAX00001172080 EGAD00001001408 https://ega-archive.org/datasets/EGAD00001001408
ChIP-Seq Histone H3K27me3 EGA EGAX00001172081 EGAD00001001404 https://ega-archive.org/datasets/EGAD00001001404
WGS WGS EGA EGAX00001174993 EGAD00001001400 https://ega-archive.org/datasets/EGAD00001001400
ChIP-Seq Histone H3K36me3 EGA EGAX00001172082 EGAD00001001405 https://ega-archive.org/datasets/EGAD00001001405
ChIP-Seq Histone H3K27ac EGA EGAX00001172083 EGAD00001001403 https://ega-archive.org/datasets/EGAD00001001403
ChIP-Seq ChIP-Seq Input EGA EGAX00001172084 EGAD00001001409 https://ega-archive.org/datasets/EGAD00001001409
Bisulfite-Seq DNA Methylation EGA EGAX00001178274 EGAD00001001312 https://ega-archive.org/datasets/EGAD00001001312
RNA-Seq mRNA-Seq EGA EGAX00001172102 EGAD00001001402 https://ega-archive.org/datasets/EGAD00001001402
miRNA-Seq smRNA-Seq EGA EGAX00001169504 EGAD00001001401 https://ega-archive.org/datasets/EGAD00001001401