IHECRE00000014.3 LIVE IHEC harmonized v2.0 JSON  

Species Homo sapiens
Type Single donor
Status Complete
Project BLUEPRINT
Description Acute Myeloid Leukemia from bone marrow of donor: UMCG00017
Previous versions IHECRE00000014.2   IHECRE00000014.1  

Metadata


Biomaterial type primary cell
Cell type myeloid cell
Tissue type bone marrow
Cell markers CD33+
Biospecimen
    Broad label myeloid cell
    Intermediate label myeloid cell
    Curated label Acute Myeloid Leukemia
    Ontology curie CL:0000763
Biospecimen disease
    Broad label Cancer
    Intermediate label Leukemia
    Curated label Acute Myeloid Leukemia
    Ontology curie NCIM:C4015937
Donor
    Type Single donor
    ID UMCG00017
    Age 70-75
    Age unit year
    Life stage adult
    Sex female
    Health status Acute Myeloid Leukemia
    Health status ontology curie NCIM:C4015937

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq Histone H3K36me3 EGA EGAX00001171944 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
RNA-Seq total-RNA-Seq EGA EGAX00001296239 EGAD00001002465 https://ega-archive.org/datasets/EGAD00001002465
ChIP-Seq Histone H3K27ac EGA EGAX00001171921 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
ChIP-Seq ChIP-Seq Input EGA EGAX00001133249 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
Bisulfite-Seq DNA Methylation EGA EGAX00001290293 EGAD00001002419 https://ega-archive.org/datasets/EGAD00001002419
ChIP-Seq Histone H3K4me1 EGA EGAX00001272700 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
DNase-Hypersensitivity Chromatin Accessibility EGA EGAX00001125983 EGAD00001002355 https://ega-archive.org/datasets/EGAD00001002355
ChIP-Seq Histone H3K27me3 EGA EGAX00001133245 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
ChIP-Seq Histone H3K9me3 EGA EGAX00001291817 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418
ChIP-Seq Histone H3K4me3 EGA EGAX00001133244 EGAD00001002418 https://ega-archive.org/datasets/EGAD00001002418