IHECRE00000008.3 PREVIOUS JSON
| Species | Homo sapiens |
| Type | Single donor |
| Status | Complete |
| Project | BLUEPRINT |
| Description | macrophage from venous blood of donor: S00390 |
| Live version | IHECRE00000008.4 |
| Previous versions | IHECRE00000008.2 IHECRE00000008.1 |
Metadata
| Biomaterial type | Primary Cell Culture |
| Disease ontology uri | NA |
| Donor id | S00390 |
| Donor ethnicity | NA |
| Passage if expanded | http://www.blueprint-epigenome.eu/UserFiles/file/Protocols/UCAM_BluePrint_Macrophage.pdf |
| Donor sex | Male |
| Subject id | S00390 |
| Gender | male |
| Tissue type | venous blood |
| Taxon id | 9606 |
| Disease | None |
| Sample ontology uri | http://purl.obolibrary.org/obo/CL_0000235;http://purl.obolibrary.org/obo/UBERON_0013756 |
| Donor age | 50 - 55 |
| Culture conditions | http://www.blueprint-epigenome.eu/UserFiles/file/Protocols/UCAM_BluePrint_Macrophage.pdf |
| Phenotype | CL:0000235;PATO:0000461;UBERON:0013756 |
| Cell type | macrophage |
| Markers | http://www.blueprint-epigenome.eu/index.cfm?p=7BF8A4B6-F4FE-861A-2AD57A08D63D0B58 |
| Biomaterial provider | NIHR Cambridge BioResource |
| Donor health status | NA |
Experimental data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | ChIP-Seq Input | EGA | EGAX00001215620 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001128244 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| RNA-Seq | total-RNA-Seq | EGA | EGAX00001133252 | EGAD00001002507 | https://ega-archive.org/datasets/EGAD00001002507 |
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001128243 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| Bisulfite-Seq | DNA Methylation | EGA | EGAX00001147731 | EGAD00001002501 | https://ega-archive.org/datasets/EGAD00001002501 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001128235 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001128234 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001128195 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001128196 | EGAD00001002504 | https://ega-archive.org/datasets/EGAD00001002504 |