IHECRE00000002.3 PREVIOUS JSON  

Species Homo sapiens
Type Single donor
Status Partial
Project BLUEPRINT
Description Acute Promyelocytic Leukemia - MC2884 (4h) from bone marrow of donor: pz 289
Live version IHECRE00000002.4
Previous versions IHECRE00000002.2   IHECRE00000002.1  

Metadata


Biomaterial type Primary Cell
Disease ontology uri http://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0023487
Donor id pz 289
Donor ethnicity Caucasian
Passage if expanded NA
Genetic characteristics Translocation t(15;17)
Donor sex Female
Gender female
Tissue type bone marrow
Taxon id 9606
Disease Acute Promyelocytic Leukemia
Sample ontology uri http://purl.obolibrary.org/obo/CL_0000763
Donor age 30 - 35
Treatment MC2884 (4h)
Phenotype CL_0000763;C0023487;UBERON_0002371
Cell type myeloid cell
Markers NA
Biomaterial provider Prof: Lucia Altucci (SECONDA UNIVERSITA' di NAPOLI- IT)
Donor health status Acute Promyelocytic Leukemia

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq Histone H3K4me1 EGA EGAX00001215591 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
ChIP-Seq Histone H3K27me3 EGA EGAX00001138954 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
ChIP-Seq Histone H3K27ac EGA EGAX00001171913 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
ChIP-Seq Histone H3K36me3 EGA EGAX00001215590 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
ChIP-Seq Histone H3K4me3 EGA EGAX00001138915 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
ChIP-Seq Histone H3K9me3 EGA EGAX00001272606 EGAD00001002372 https://ega-archive.org/datasets/EGAD00001002372
RNA-Seq total-RNA-Seq EGA EGAX00001185207 EGAD00001002513 https://ega-archive.org/datasets/EGAD00001002513