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CHEBI:10048 - XDP

ChEBI IDCHEBI:10048
ChEBI NameXDP
Stars
DefinitionA purine ribonucleoside 5'-diphosphate having xanthosine as the nucleobase.
Last Modified25 January 2016
DownloadsMolfile
FormulaC10H14N4O12P2
Net Charge0
Average Mass444.186
Monoisotopic Mass444.00835
SMILESO=c1nc(=O)c2ncn([C@@H]3O[C@H](COP(=O)(O)OP(=O)(O)O)[C@@H](O)[C@H]3O)c2n1
InChIInChI=1S/C10H14N4O12P2/c15-5-3(1-24-28(22,23)26-27(19,20)21)25-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H,22,23)(H2,19,20,21)(H2,12,13,17,18)/t3-,5-,6-,9-/m1/s1
InChIKeyYMOPVQQBWLGDOD-UUOKFMHZSA-N
Species of MetaboliteComponentSourceComments
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Roles Classification
Biological Roles:
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
ChEBI Ontology
Outgoing Relation(s)
XDP (CHEBI:10048) has role Escherichia coli metabolite (CHEBI:76971)
XDP (CHEBI:10048) is a purine ribonucleoside 5'-diphosphate (CHEBI:37038)
XDP (CHEBI:10048) is a xanthosine 5'-phosphate (CHEBI:53012)
XDP (CHEBI:10048) is conjugate acid of XDP(3−) (CHEBI:59884)
Incoming Relation(s)
XDP(3−) (CHEBI:59884) is conjugate base of XDP (CHEBI:10048)
IUPAC Name 
xanthosine 5'-(trihydrogen diphosphate)
Manual XrefsDatabases
US4880918Patent
Registry NumbersSources
Beilstein:7400006Beilstein