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CHEBI:15698 - 2'-deoxycytidine

ChEBI IDCHEBI:15698
ChEBI Name2'-deoxycytidine
Stars
DefinitionA pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.
Secondary ChEBI IDsCHEBI:4407, CHEBI:19240, CHEBI:41417, CHEBI:41430, CHEBI:41434, CHEBI:41806
Last Modified27 January 2016
DownloadsMolfile
FormulaC9H13N3O4
Net Charge0
Average Mass227.220
Monoisotopic Mass227.09061
SMILESNc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
InChIInChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1
InChIKeyCKTSBUTUHBMZGZ-SHYZEUOFSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Saccharomyces cerevisiae (ncbitaxon:4932) - PubMed (24678285) Source: yeast.sf.net
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Roles Classification
Biological Roles:
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
Saccharomyces cerevisiae metabolite  Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
ChEBI Ontology
Outgoing Relation(s)
2'-deoxycytidine (CHEBI:15698) has functional parent cytosine (CHEBI:16040)
2'-deoxycytidine (CHEBI:15698) has role Escherichia coli metabolite (CHEBI:76971)
2'-deoxycytidine (CHEBI:15698) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
2'-deoxycytidine (CHEBI:15698) has role human metabolite (CHEBI:77746)
2'-deoxycytidine (CHEBI:15698) has role mouse metabolite (CHEBI:75771)
2'-deoxycytidine (CHEBI:15698) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255)
Incoming Relation(s)
N-Benzoyl-2'-deoxycytidine (CHEBI:229529) has functional parent 2'-deoxycytidine (CHEBI:15698)
5-methyl-2'-deoxycytidine (CHEBI:47876) is a 2'-deoxycytidine (CHEBI:15698)
IUPAC Name 
2'-deoxycytidine
Synonyms  Source
DeoxycytidineKEGG COMPOUND
2'-DeoxycytidineKEGG COMPOUND
dCChEBI
4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-oneIUPAC
dCYDChemIDplus
2'-DEOXYCYTIDINEPDBeChem
UniProt Name  Source
2'-deoxycytidineUniProt
Manual XrefsDatabases
C00881KEGG COMPOUND
DCZPDBeChem
DB02594DrugBank
DEOXYCYTIDINEMetaCyc
DeoxycytidineWikipedia
HMDB0000014HMDB
Registry NumbersSources
Gmelin:1321747Gmelin
Reaxys:87567Reaxys
CAS:951-77-9KEGG COMPOUND
CAS:951-77-9ChemIDplus
CAS:951-77-9NIST Chemistry WebBook
Citations