E-MTAB-8016 - RNA-seq of liver samples from adult Ryukyu mice (Mus caroli)

Status
Last updated on 20 November 2019, released on 20 November 2019
Organism
Mus caroli
Samples (2)
Protocols (4)
Description
We explored the relationship between the evolutionary dynamics of CTCF binding and the functional stability of higher order genome structures, by performing ChIP-seq experiments in closely related Mus species or strains and intersecting with Hi-C-derived topologically associating domains (TADs) and expression data. To complement our data analyses, we generated RNA-seq libraries from two Mus caroli adult male individuals.
Experiment type
RNA-seq of total RNA 
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-8016.idf.txt
Sample and data relationshipE-MTAB-8016.sdrf.txt
Links