E-MTAB-7512 - Hi-C in D. melanogaster carrying second (CyO) and third (TM3) balancer chromosomes

Status
Last updated on 23 April 2019, released on 24 April 2019
Organism
Drosophila melanogaster
Samples (2)
Protocols (4)
Description
We used a Drosophila melanogaster line (a "double balancer") carrying balancer chromosomes for both the second (CyO) and third (TM3) chromosomes, and crossed it to an isogenic wild-type "virginizer" line. Trans-heterozygous adults from the F1 generation were further crossed to the wild-type parental line to obtain the pool of N1 embryos. Allele-specific chromosome conformation capture (Hi-C) was used to measure changes in chromatin organization on both chromosomes.
Experiment type
Hi-C 
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-7512.idf.txt
Sample and data relationshipE-MTAB-7512.sdrf.txt
Links