E-MTAB-7510 - Whole-genome sequencing and mate pair sequencing of D. melanogaster carrying second (CyO) and third (TM3) balancer chromosomes

Status
Last updated on 2 May 2019, released on 2 May 2019
Organism
Drosophila melanogaster
Samples (4)
Protocols (7)
Description
We used a Drosophila melanogaster line (a "double balancer") carrying balancer chromosomes for both the second (CyO) and third (TM3) chromosomes. We crossed the double balancer to an isogenic wild-type "virginizer" line to obtain trans-heterozygous adults from the F1 generation. Whole-genome sequencing and mate pair sequencing were used to identify Single Nucleotide Variants (SNVs) and Structural Variants (SVs) on both chromosomes.
Experiment types
DNA-seq, genotyping design
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-7510.idf.txt
Sample and data relationshipE-MTAB-7510.sdrf.txt
Links