E-MTAB-4511 - RNA-seq in HUVECs overexpressing Sox18 and treated with Sm4

Status
Submitted on 28 September 2015, last updated on 4 May 2016, released on 1 February 2017
Organism
Homo sapiens
Samples (12)
Protocols (6)
Description
We investigated the transcriptome of HUVECs under basal conditions and overexpression of Sox18 in presence or absence of small molecule protein-protein disruptor Sm4. Various RNA fractions were prepared and sequenced in order to characterise Sox18 and Sm4 responsive genes in HUVECs
Experiment types
RNA-seq of coding RNA, compound treatment design, replicate design, validation by reverse transcription PCR design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-4511.idf.txt
Sample and data relationshipE-MTAB-4511.sdrf.txt
Links