E-MTAB-3947 - Analysis of single CD41 cell transcriptomes from Zebrafish
Submitted on 1 November 2014, released on 8 January 2016, last updated on 26 January 2016
Transcriptome data from individual CD41 expressing cells isolated from kidney and heart of zebrafish. CD41 is a marker both for HSCs and thrombocytes, and with this data we study thrombocyte development as a continuous process. Single cell transcriptomes are matched with flourescence of a CD41:GFP reporter.
RNA-seq of coding RNA from single cells
Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells. Iain C. Macaulay, Valentine Svensson, Charlotte Labalette, Lauren Ferreira, Fiona Hamey, Thierry Voet, Sarah A. Teichmann, Ana Cvejic. Cell Reports (2016), PMID:26804912