E-MTAB-3917 - Whole genome sequencing of Drosophila spontaneous midgut neoplasias and control tissues

Status
Submitted on 28 January 2015, last updated on 8 October 2015, released on 8 October 2015
Organism
Drosophila melanogaster
Samples (9)
Protocols (5)
Description
Whole genome sequencing was performed in order to uncover genomic mutations present in spontaneous neoplasias present in aged male midguts. DNA was extracted from neoplasias (marked by ProsGal4 UAS-GFP), adjacent tissue and head of the same fly. The DNA library was prepared using the DNA Nano protocol from Illumina and 2X125 bp paired-end Illumina Hi-Seq was performed by Fasteris, SA (Geneva, CHE).
Experiment types
DNA-seq, organism part comparison design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-3917.idf.txt
Sample and data relationshipE-MTAB-3917.sdrf.txt
Links