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E-MTAB-2600 - Single cell mRNA -sequencing reveals cell-to-cell variation in three mouse ES cell culture conditions
Status | Released on 22 January 2016, last updated on 28 July 2017 | ||||||||||
Organism | Mus musculus | ||||||||||
Samples (869) | |||||||||||
Protocols (4) | |||||||||||
Description | We sequence mRNA from single mESCs from three culture conditions: serum + LIF, 2i + LIF and alternative 2i + LIF. We extensively analysed population and single cell gene expression to identify differences and similarities between conditions. This is a subset of data from ArrayExpress accession E-ERAD-186 (ENA: ERP003293) | ||||||||||
Experiment types | RNA-seq of coding RNA, co-expression, growth condition design, in vitro | ||||||||||
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Citation | Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression. Kim JK, Kolodziejczyk AA, Ilicic T, Illicic T, Teichmann SA, Marioni JC. , PMID:26489834 | ||||||||||
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