E-MTAB-2323 - Promoter capture GM12878 CD34
Status | Released on 1 March 2015, last updated on 21 April 2015 | ||||||||||
Organism | Homo sapiens | ||||||||||
Samples (11) | |||||||||||
Protocols (3) | |||||||||||
Description | Genome organization influences transcriptional regulation by facilitating interactions between gene promoters and distal regulatory elements. To analyse distal promoter contacts we used Capture Hi-C (CHi-C) to enrich for promoter-interactions in a HiC lib | ||||||||||
Experiment types | DNA-seq, cell type comparison design, in vivo, replicate design | ||||||||||
Contacts | Borbala Mifsud <Borbala.Mifsud@cancer.org.uk>, Cameron Osborne <cameron.osborne@babraham.ac.uk>, Filipe Tavares-Cadete | ||||||||||
Citation | Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C. Borbala Mifsud, Filipe Tavares-Cadete, Alice N. Young, Robert Sugar, Stefan Schoenfelder, Lauren Ferreira, Steven Wingett, Simon Andrews, William Grey, Philip A. Ewels, Bram Herman, Scott Happe, Andy Higgs, Emily LeProust, George A. Follows, Peter Fraser, Nicholas M. Luscombe, Cameron S. Osborne. | ||||||||||
MINSEQE |
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