E-MTAB-198 - Transcription profiling by array of human HapMap CEU caucasian lymphoblastoid cells to investigate candidate causal regulatory effects
Status | Released on 1 June 2010, last updated on 2 May 2014 | ||||||||||
Organism | Homo sapiens | ||||||||||
Samples (114) | |||||||||||
Array (1) | |||||||||||
Protocols (5) | |||||||||||
Description | Array quantification of 112 HapMap CEU individuals, 60 supporting RNA-seq of the same individuals, 109 supporting HapMap3 analysis | ||||||||||
Experiment types | transcription profiling by array, in vitro, individual genetic characteristics | ||||||||||
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Citations | Transcriptome genetics using second generation sequencing in a Caucasian population. Stephen B. Montgomery, Micha Sammeth, Maria Gutierrez-Arcelus, Radoslaw P. Lach, Catherine Ingle, James Nisbett, Roderic Guigo, Emmanouil T. Dermitzakis. Host genetic variants and gene expression patterns associated with Epstein-Barr virus copy number in lymphoblastoid cell lines. Houldcroft CJ, Petrova V, Liu JZ, Frampton D, Anderson CA, Gall A, Kellam P. :e108384 (2014), PMID:25290448 Sex-biased genetic effects on gene regulation in humans. Antigone S. Dimas; Alexandra C. Nica; Stephen B. Montgomery; Barbara E. Stranger; Towfique Raj; Alfonso Buil; Thomas Giger; Tuuli Lappalainen; Maria Gutierrez-Arcelus; Mark I. McCarthy; Emmanouil T. Dermitzakis. Genome Res 22(12):2368 (2012), PMID:22960374 Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations. Alexandra C. Nica, Stephen B. Montgomery, Antigone S. Dimas, Barbara E. Stranger, Claude Beazley, Ines Barroso, Emmanouil T. Dermitzakis. | ||||||||||
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