E-MTAB-1951 - Transcription profiling by array of surgically resected liver metastasis from hepatic metastatic colorectal cancer patients

Status
Released on 14 January 2014, last updated on 3 June 2014
Organism
Homo sapiens
Samples (96)
Array (1)
Protocols (6)
Description
The goal of this experiment was to build gene expression signature associated with long-term outcomes of patients with hepatic metastatic colorectal cancer. The samples were corrected from surgically resected liver metastasis and extracted RNA was subjected to Illumina expression gene chip analysis.
Experiment types
transcription profiling by array, co-expression, ex vivo, translational
Contact
Citations
Gene expression profiles accurately predict outcome following liver resection in patients with metastatic colorectal cancer. Ito H, Mo Q, Qin LX, Viale A, Maithel SK, Maker AV, Shia J, Kingham P, Allen P, DeMatteo RP, Fong Y, Jarnagin WR, DAngelica M. :e81680 (2013), Europe PMC 24339954
Genetic evidence that intratumoral T-cell proliferation and activation are associated with recurrence and survival in patients with resected colorectal liver metastases. Maker AV, Ito H, Mo Q, Weisenberg E, Qin LX, Turcotte S, Maithel S, Shia J, Blumgart L, Fong Y, Jarnagin WR, DeMatteo RP, DAngelica MI. :380-388 (2015), Europe PMC 25600439
Gene expression profiles accurately predict outcome following liver resection in patients with metastatic colorectal cancer. Hiromichi Ito, Qianxing Mo, Li-Xuan Qin, Agnes Viale, Shishir K Maithel, Ajay V Maker, Jinru Shia, Peter Kingham, Peter Allen, Ronald P DeMatteo, Yuman Fong, William R Jarnagin, Michael D’Angelica.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-1951.idf.txt
Sample and data relationshipE-MTAB-1951.sdrf.txt
Raw data (1)E-MTAB-1951.raw.1.zip
Array designA-MEXP-1171.adf.txt
Links