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E-GEOD-69001 - Type IV pili promote early biofilm formation by Clostridium difficile

Status
Released on 18 May 2016, last updated on 21 May 2016
Organism
Peptoclostridium difficile R20291
Samples (9)
Protocols (2)
Description
Transcriptional analysis of Clostridium difficile R20291 in biofilm formation, planktonic state and grown on blood agar RNA sequencing was performed on Clostridium difficile R20291 in three different conditions: Biofilm formation, plantonic state and grown on blood agar plates. Each condtion has 3 replicates.
Experiment type
RNA-seq of coding RNA 
Contacts
Sean Daugherty <sdaugherty@som.umaryland.edu>, Alison J Scott, Eric J Sundberg, Erik C von Rosenvinge, Grace A Maldarelli, Jeffrey A Freiberg, Kurt H Piepenbrink, Mark E Shirtliff, Michael S Donnenberg, Robert K Ernst, Yang Song, Yvonne Achermann
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-69001.idf.txt
Sample and data relationshipE-GEOD-69001.sdrf.txt
Additional data (1)E-GEOD-69001.additional.1.zip
Links