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E-GEOD-53938 - The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites (ChIP-seq KYSE150 cell line)

Status
Released on 9 January 2014, last updated on 15 April 2014
Organism
Homo sapiens
Samples (8)
Protocols (4)
Description
We have mapped binding sites for the histone demethylase, JMJD2C/KDM4C/GASC1, and the effect of JMJD2C depletion on H3K9me3 and H3K36me3 distributions in KYSE150 cells. The human esophageal carcinoma cell line, KYSE150, contains an amplification of the JMJD2C locus. ChIP-seq was performed using chromatin from control or JMJD2C-depleted KYSE150 cells and antibodies recognizing JMJD2C, H3K4me3, H3K9me3 or H3K36me3.
Experiment type
ChIP-seq 
Contacts
Citation
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
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