Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-43816 - Response to Neoadjuvant Chemotherapy in Triple Negative Breast tumors

Status
Released on 24 March 2016, last updated on 25 March 2016
Organism
Homo sapiens
Samples (14)
Array (1)
Protocols (6)
Description
In a cohort study of 7 women with primary invasive breast cancer, we obtained a tumor specimen before (biopsy) and after (tumorectomy) 4 cycles of NAC with epirubicine and cyclophosphamide, followed by 4 cycles of taxanes. Total RNA was extracted from tumor specimens and the whole transcriptome was quantified with Affymetrix HuGene1.1ST. Molecular functions changing during chemotherapy were searched. Whole genome expression of triple negative breast cancer tissues were measured before and after four cycles neoadjuvant chemotherapy
Experiment type
transcription profiling by array 
Contacts
Fatima Mechta-Grigoriou, Tina Gruosso, Yann Kieffer
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-43816.idf.txt
Sample and data relationshipE-GEOD-43816.sdrf.txt
Raw data (1)E-GEOD-43816.raw.1.zip
Processed data (1)E-GEOD-43816.processed.1.zip
Array designA-GEOD-11532.adf.txt
Links