Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.
E-GEOD-36042 - Continuous gene expression profile of leaf at nighttime throughout the entire growth of rice in the field
Released on 3 December 2012, last updated on 20 April 2016
Oryza sativa Japonica Group
A continuous gene expression profiling of leaves was performed during nighttime at regular interval from transplanting until harvesting to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant under natural field conditions. The uppermost fully-expanded leaf in the main stem corresponding to the 1st leaf until 83 days after transplanting (DAT) and the flag leaf from them on were sampled in two replicates at 12:00 midnight at 7- day intervals encompassing 17 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.
transcription profiling by array
Baltazar Antonio, Nobukazu Namiki, Yoshiaki Nagamura, Yutaka Sato
RiceXPro Version 3.0: expanding the informatics resource for rice transcriptome. Sato Y, Takehisa H, Kamatsuki K, Minami H, Namiki N, Ikawa H, Ohyanagi H, Sugimoto K, Antonio BA, Nagamura Y. , PMID:23180765
RiceFREND: a platform for retrieving coexpressed gene networks in rice. Sato Y, Namiki N, Takehisa H, Kamatsuki K, Minami H, Ikawa H, Ohyanagi H, Sugimoto K, Itoh JI, Antonio BA, Nagamura Y. , PMID:23180784