Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-31008 - A key role for Mbd3 in 5-hydroxymethylcytosine-dependent gene regulation in embryonic stem cells

Status
Released on 1 December 2011, last updated on 13 December 2011
Organism
Mus musculus
Samples (44)
Array (1)
Protocols (8)
Description
To identify functional interactions among six chromatin regulators with key roles in embryonic stem cells, we examined gene expression changes in mouse ES cells with single and pair-wise combinations of knockdowns for those factors, along with control (EGFP) KDs. Effects on gene expression of RNAi-mediated knockdown of combinations of chromatin regulators. KDs were performed in duplicate for each combination for 48 hours.
Experiment type
transcription profiling by array 
Contacts
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-31008.idf.txt
Sample and data relationshipE-GEOD-31008.sdrf.txt
Raw data (1)E-GEOD-31008.raw.1.zip
Processed data (1)E-GEOD-31008.processed.1.zip
Array designA-MEXP-724.adf.txt
Links