Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-30321 - Gene expression profiling of Chinese Hamster Ovary production cell lines

Status
Released on 27 July 2011, last updated on 19 September 2011
Organism
Cricetulus griseus
Samples (295)
Array (1)
Protocols (8)
Description
The dataset set consists of 295 microarrays from 121 individual CHO cultures producing a range of biologics including monoclonal antibodies, fusion proteins and therapeutic factors; non-producing cell lines were also included. Samples were taken from a wide range of process scales and formats that varied in terms of seeding density, temperature, medium, feed medium, culture duration and product type. Cells were sampled for gene expression analysis at various stages of the culture and bioprocess-relevant characteristics including cell density, growth rate, viability, lactate, ammonium and cell specific productivity (Qp) were determined A total of 295 microarray samples were assayed. In addition 9 continous bioprocess variables were also measured.
Experiment type
transcription profiling by array 
Contacts
Colin Clarke <colin.clarke@dcu.ie>, Colin Clarke, Finbarr O'Sullivan, Mark Leonard, Mark Melville, Martin Clynes, Niall Barron, Padraig Doolan, Patrick Gammell, Paula Meleady
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-30321.idf.txt
Sample and data relationshipE-GEOD-30321.sdrf.txt
Processed data (1)E-GEOD-30321.processed.1.zip
Array designA-GEOD-13791.adf.txt
Links