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E-GEOD-27032 - Global gene expression of Ruegeria pomeroyi strain DSS3 in response to glucose, ammonium, phosphate, or sulfate limitation

Status
Released on 30 September 2011, last updated on 12 October 2011
Organism
Ruegeria pomeroyi DSS-3
Samples (14)
Array (1)
Protocols (10)
Description
We used the previously designed oligonucleotide-based microarray (Burgmann et al. Environmental Microbiology 2007, 9: 2742-2755) to detect the transcripts of R. pomeroyi DSS-3 genes when the cells were cultured under steady-state carbon (glucose), nitrogen (ammonium), phosphorus (phosphate), or sulfur (sulfate) limitation. A total of 14 mRNA samples were hybridized to the arrays (three biological replicates from glucose, ammonium, phosphate, or sulfate limitation and one technical replicate each for ammonium or sulfate limitation)
Experiment type
transcription profiling by array 
Contacts
Leong-Keat Chan, Mary A Moran, Ryan Newton, Shalabh Sharma
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-27032.idf.txt
Sample and data relationshipE-GEOD-27032.sdrf.txt
Raw data (1)E-GEOD-27032.raw.1.zip
Processed data (1)E-GEOD-27032.processed.1.zip
Array designA-GEOD-4067.adf.txt
Links