E-ERAD-221 - Simultaneous host parasite RNA sequencing of mosquito transmistted rodent malaria in two host backgrounds

Status
Released on 4 March 2014, last updated on 18 May 2016
Organism
Mus musculus, Plasmodium chabaudi
Samples (181)
Protocols (2)
Description
The aim of this study is to explore the role of differences in host genetic background which will supplement our current analysis of a timecourse of P.chabaudi infection in C57BL/6 mice over the peak of parasitemia. We have also published a paper showing that infections using mosquito-transmitted parasites have a quite different effect on the host immune system (Spence et al, Nature, 2013) and using this study we can compare the effects in host and parasite of serially blood passaged parasites versus mosquito transmitted parasites. This is in collaboration with Jean Langhorne at NIMR.This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/
Experiment type
RNA-seq of coding RNA 
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-ERAD-221.idf.txt
Sample and data relationshipE-ERAD-221.sdrf.txt
Links