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PDBsum entry 7b0h

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 7b0h calculated with MOLE 2.0 PDB id
7b0h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.06 1.06 18.0 -0.13 -0.22 9.5 78 2 1 0 2 1 1 0  
2 1.04 1.04 19.5 -0.72 -0.47 11.0 78 2 1 1 1 1 1 0  
3 1.06 1.06 17.9 -0.38 -0.31 10.7 78 2 1 0 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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