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PDBsum entry 6zmd
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Pore analysis for: 6zmd calculated with  MOLE 2.0
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PDB id
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6zmd
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.46 |
2.24 |
31.6 |
-1.73 |
-0.65 |
14.9 |
86 |
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3 |
3 |
4 |
3 |
0 |
1 |
0 |
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2 |
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1.41 |
1.41 |
42.9 |
-2.82 |
-0.70 |
32.3 |
87 |
4 |
2 |
2 |
1 |
0 |
0 |
0 |
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3 |
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1.35 |
1.85 |
44.8 |
-2.66 |
-0.57 |
31.1 |
80 |
6 |
8 |
3 |
1 |
2 |
0 |
0 |
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4 |
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1.69 |
2.42 |
44.6 |
-2.87 |
-0.61 |
35.9 |
76 |
4 |
5 |
1 |
2 |
1 |
1 |
0 |
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5 |
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1.21 |
1.75 |
104.8 |
-1.38 |
-0.22 |
20.2 |
83 |
12 |
9 |
5 |
9 |
5 |
1 |
0 |
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6 |
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2.62 |
2.88 |
25.2 |
-0.70 |
-0.41 |
16.1 |
85 |
0 |
4 |
2 |
3 |
0 |
2 |
0 |
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7 |
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2.32 |
2.33 |
34.2 |
-1.09 |
-0.25 |
11.0 |
91 |
1 |
2 |
4 |
4 |
1 |
1 |
0 |
QMK 602 A
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8 |
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1.22 |
2.14 |
40.0 |
-1.22 |
-0.38 |
19.3 |
86 |
2 |
6 |
3 |
2 |
1 |
1 |
0 |
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9 |
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1.44 |
1.43 |
50.3 |
-0.53 |
-0.19 |
9.3 |
89 |
5 |
0 |
3 |
6 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program