PDBsum entry 6zmd Go to PDB code:  Tunnel analysis for: 6zmd calculated with MOLE 2.0 PDB id 6zmd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 0.99 0.99 32.9 -0.42 -0.08 7.8 80 3 0 3 4 2 1 1  QMK 602 A 2 1.01 1.01 48.5 -1.32 -0.17 16.1 83 6 2 5 5 3 1 0  QMK 602 A PO4 501 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.