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PDBsum entry 6tps

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6tps calculated with MOLE 2.0 PDB id
6tps
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.32 18.5 -1.59 -0.58 13.6 80 2 1 3 1 1 0 1  
2 1.38 1.38 15.2 -1.55 -0.51 12.7 78 1 1 2 1 1 1 0  
3 1.17 1.84 15.1 1.16 0.58 12.9 72 1 1 0 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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