PDBsum entry 6t3d Go to PDB code:  Tunnel analysis for: 6t3d calculated with MOLE 2.0 PDB id 6t3d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.33 17.3 -1.16 -0.23 23.0 92 2 2 2 2 1 0 0   2 1.33 1.33 22.3 -0.63 -0.20 9.4 85 2 1 5 4 2 0 0   3 1.26 2.21 23.6 -0.51 -0.19 8.7 88 2 1 5 5 1 0 0   4 1.24 1.35 16.4 -1.41 -0.45 13.3 82 2 0 3 4 0 2 0   5 1.60 1.63 15.1 -1.38 -0.55 13.9 74 1 2 1 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.