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PDBsum entry 6qwf

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Top Page protein dna_rna ligands Protein-protein interface(s) pores links
Pore analysis for: 6qwf calculated with MOLE 2.0 PDB id
6qwf
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.02 2.02 55.3 -1.03 -0.64 5.4 86 3 0 4 2 2 0 0  DG 6 C DT 16 C DT 17 C DG 18 C DT 19 C DT 20 C DA
21 C DA 16 D DT 17 D DG 18 D DT 19 D DT 20 D DA
21 D
2 1.32 3.40 39.4 0.10 0.36 8.0 72 3 2 2 7 5 0 1  GOL 301 A DG 6 C DC 7 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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