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PDBsum entry 6pw2

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 6pw2 calculated with MOLE 2.0 PDB id
6pw2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.17 26.8 -2.01 -0.61 23.0 88 4 1 2 0 0 0 0  DA 40 E DT 41 E DA 42 E DT 43 E DA 21 F DT 22 F
2 1.14 1.35 34.7 -1.34 -0.44 17.4 81 5 0 2 1 1 0 1  DA 42 E DT 43 E DG 44 E DC 45 E DT 15 F DA 16 F
DG 17 F DT 22 F
3 1.33 2.15 19.6 1.06 0.30 8.6 86 1 1 1 6 0 0 0  DT 11 H DC 12 H
4 1.78 1.83 16.4 -2.44 -0.40 15.2 82 1 0 2 0 1 1 0  DG 35 G DT 36 G DA 26 H DC 27 H
5 1.71 1.89 17.5 -2.18 -0.50 17.3 81 2 0 1 0 1 0 0  DG 35 G DT 36 G DA 37 G DA 38 G DA 21 H DT 22 H
DT 24 H
6 1.43 1.45 18.2 -0.67 -0.29 17.3 86 2 2 0 4 1 0 0  
7 1.67 1.76 21.6 -1.36 -0.35 13.8 88 3 0 2 1 1 0 0  DG 35 G DT 36 G DT 22 H DT 24 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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