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PDBsum entry 6ndh
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Pore analysis for: 6ndh calculated with  MOLE 2.0
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PDB id
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6ndh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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19 pores,
coloured by radius
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19 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.96 |
4.43 |
42.6 |
-2.16 |
-0.45 |
24.3 |
77 |
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7 |
1 |
4 |
1 |
2 |
0 |
0 |
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2 |
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1.45 |
1.60 |
53.4 |
-1.70 |
-0.25 |
14.2 |
79 |
6 |
3 |
7 |
2 |
5 |
1 |
0 |
SO4 202 K NA 402 L
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3 |
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1.43 |
1.46 |
64.2 |
-1.68 |
-0.43 |
16.6 |
80 |
6 |
4 |
6 |
4 |
5 |
0 |
0 |
CL 201 H SO4 202 H NA 402 I
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4 |
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1.22 |
1.85 |
75.0 |
-2.46 |
-0.47 |
29.9 |
82 |
10 |
5 |
1 |
1 |
1 |
1 |
0 |
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5 |
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1.46 |
1.60 |
77.6 |
-2.25 |
-0.35 |
24.9 |
82 |
11 |
5 |
3 |
3 |
3 |
0 |
0 |
SO4 202 K NA 402 L
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6 |
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2.85 |
3.12 |
87.4 |
-1.20 |
-0.14 |
14.3 |
77 |
8 |
3 |
7 |
1 |
5 |
1 |
2 |
CL 404 C CL 202 E
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7 |
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1.26 |
1.90 |
90.7 |
-1.18 |
-0.32 |
11.9 |
82 |
5 |
5 |
9 |
6 |
5 |
0 |
0 |
SO4 202 Q NA 404 R
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8 |
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2.04 |
2.86 |
101.4 |
-1.87 |
-0.37 |
21.1 |
78 |
16 |
2 |
9 |
1 |
6 |
1 |
0 |
CL 202 E
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9 |
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1.76 |
1.94 |
106.3 |
-1.71 |
-0.53 |
18.0 |
81 |
10 |
8 |
9 |
3 |
3 |
2 |
0 |
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10 |
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1.41 |
1.47 |
131.6 |
-2.08 |
-0.42 |
20.1 |
76 |
9 |
5 |
7 |
3 |
6 |
1 |
0 |
SO4 202 H NA 402 I
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11 |
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1.46 |
1.63 |
138.9 |
-2.29 |
-0.52 |
23.7 |
82 |
18 |
11 |
12 |
5 |
5 |
0 |
0 |
CL 202 E SO4 203 E NA 402 F
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12 |
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1.77 |
1.93 |
141.6 |
-1.82 |
-0.53 |
20.0 |
85 |
14 |
9 |
13 |
5 |
3 |
1 |
0 |
CL 202 E
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13 |
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1.37 |
1.37 |
144.4 |
-1.34 |
-0.35 |
14.0 |
84 |
12 |
4 |
12 |
9 |
4 |
2 |
0 |
SO4 402 R
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14 |
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1.36 |
1.56 |
157.1 |
-2.15 |
-0.55 |
20.8 |
82 |
18 |
10 |
13 |
4 |
5 |
1 |
0 |
CL 202 E SO4 203 E NA 402 F
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15 |
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1.42 |
1.59 |
171.0 |
-1.51 |
-0.53 |
16.2 |
84 |
9 |
4 |
9 |
4 |
2 |
1 |
0 |
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16 |
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1.47 |
1.47 |
178.6 |
-2.06 |
-0.50 |
19.8 |
82 |
20 |
12 |
16 |
6 |
7 |
0 |
0 |
CL 202 E SO4 203 E NA 402 F SO4 202 K NA 402 L
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17 |
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1.98 |
2.15 |
200.6 |
-1.76 |
-0.56 |
18.3 |
84 |
18 |
12 |
15 |
4 |
5 |
2 |
0 |
CL 202 E
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18 |
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1.45 |
1.45 |
222.6 |
-1.84 |
-0.51 |
19.8 |
82 |
14 |
12 |
14 |
7 |
6 |
3 |
0 |
SO4 202 H NA 402 I SO4 403 O
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19 |
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1.72 |
1.91 |
348.1 |
-1.83 |
-0.49 |
18.3 |
83 |
24 |
19 |
24 |
10 |
10 |
4 |
0 |
CL 201 H CL 201 M SO4 201 N NA 402 O SO4 403 O
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program