PDBsum entry 6n4y Go to PDB code:  Pore analysis for: 6n4y calculated with MOLE 2.0 PDB id 6n4y Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 5.59 5.84 30.6 -3.63 -0.69 45.4 81 7 6 2 1 0 0 0   2 5.59 5.83 41.2 -2.90 -0.61 35.6 82 6 8 3 2 1 0 0   3 2.24 2.38 55.4 -2.11 -0.69 29.2 83 5 8 1 1 1 1 0  MAN 5 J FUC 7 J 4 1.75 3.51 60.1 -1.96 -0.60 26.5 81 6 7 1 2 2 1 0  NAG 1 J NAG 2 J BMA 3 J MAN 5 J 5 4.42 4.49 63.1 -1.56 -0.42 20.1 88 3 4 8 7 1 1 0   6 1.86 2.11 66.6 -1.28 -0.32 17.5 85 7 5 10 6 3 0 0   7 2.79 4.05 66.2 -1.73 -0.08 23.9 79 9 6 1 3 4 1 0   8 1.63 1.78 75.9 -0.58 -0.17 10.8 83 3 5 5 3 3 1 1   9 3.51 3.70 76.0 -1.63 -0.46 22.4 85 7 7 7 3 1 1 1   10 1.18 1.41 80.3 -2.03 -0.51 23.4 86 4 9 10 5 3 1 0   11 2.24 2.37 81.4 -2.22 -0.55 29.2 86 6 8 8 3 1 1 0  MAN 5 J 12 1.92 3.54 95.6 -1.93 -0.51 25.6 83 8 8 6 4 2 1 0  NAG 1 J NAG 2 J BMA 3 J MAN 5 J 13 1.76 2.02 105.0 -1.53 -0.37 18.7 86 10 5 12 7 3 1 0   14 1.37 1.53 111.9 -1.72 -0.39 20.5 85 9 8 13 5 5 1 0   15 1.16 1.40 115.3 -2.02 -0.49 21.3 85 7 9 12 5 4 2 0   16 2.19 3.56 117.0 -1.67 -0.31 20.1 82 12 7 5 5 4 2 0  NAG 1 J NAG 2 J BMA 3 J MAN 5 J 17 1.50 2.48 125.5 -2.29 -0.38 31.6 82 19 15 5 6 3 1 0   18 1.25 2.11 133.9 -1.89 -0.25 26.3 82 16 10 6 10 5 2 0   19 1.61 2.44 137.3 -2.52 -0.48 30.4 84 17 12 7 4 2 2 0   20 1.26 2.82 242.1 -1.59 -0.39 21.8 83 17 16 17 14 6 3 2  NAG 601 A MAN 5 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.