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PDBsum entry 5ugp
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Pore analysis for: 5ugp calculated with  MOLE 2.0
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PDB id
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5ugp
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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3 pores,
coloured by radius
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3 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.43 |
1.67 |
26.5 |
-2.14 |
-0.46 |
24.8 |
79 |
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4 |
1 |
2 |
1 |
1 |
1 |
0 |
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DC 3 D DG 4 D DA 4 T DC 5 T DG 6 T DG 7 T DC 8 T
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2 |
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2.37 |
2.50 |
35.5 |
-2.36 |
-0.34 |
29.8 |
88 |
5 |
2 |
2 |
2 |
1 |
0 |
0 |
8CP 401 A DC 10 P DG 6 T DG 7 T DC 8 T
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3 |
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1.45 |
3.05 |
48.9 |
-2.41 |
-0.40 |
28.7 |
83 |
7 |
3 |
3 |
3 |
2 |
1 |
0 |
8CP 401 A DC 10 P DG 6 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program