PDBsum entry 5ugo Go to PDB code:  Pore analysis for: 5ugo calculated with MOLE 2.0 PDB id 5ugo Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 2.88 50.6 -2.17 -0.34 24.1 86 6 3 4 4 2 1 0  2PN 401 A DC 10 P DC 11 P DG 6 T 2 1.60 1.61 68.4 -1.53 -0.47 18.4 87 6 3 3 4 1 0 0  2PN 401 A DC 3 D DG 4 D DG 5 D DC 10 P DC 11 P DA 4 T DC 5 T DG 6 T DG 7 T DC 8 T 3 1.60 1.61 83.6 -1.23 -0.57 15.9 89 5 2 5 2 0 0 0  DC 3 D DG 4 D DG 5 D DG 1 P DT 6 P DG 7 P DA 4 T DC 5 T DG 6 T DG 7 T DC 8 T DT 12 T DC 13 T 4 1.55 1.55 100.9 -1.36 -0.49 15.8 85 6 2 6 3 1 1 0  DT 6 P DG 7 P DC 5 T DG 6 T DG 7 T DC 8 T DT 12 T DC 13 T 5 1.54 1.54 109.3 -1.25 -0.49 14.9 91 6 3 6 4 1 0 0  2PN 401 A DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P DC 11 P DT 12 T DC 13 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.