PDBsum entry 5u9h Go to PDB code:  Pore analysis for: 5u9h calculated with MOLE 2.0 PDB id 5u9h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.70 4.55 26.5 -2.54 -0.66 29.2 93 4 4 4 1 0 0 0   2 1.47 2.94 49.1 -2.81 -0.48 28.7 88 7 4 5 2 1 0 0  PPV 401 A DG 4 D DG 5 D DC 10 P C7R 11 P DG 6 T 3 1.98 1.98 61.8 -1.50 -0.18 21.0 90 5 2 3 2 1 0 0  PPV 401 A DC 10 P DA 4 T DC 5 T DG 6 T DG 7 T DC 8 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.