PDBsum entry 5o2s Go to PDB code:  Pore analysis for: 5o2s calculated with MOLE 2.0 PDB id 5o2s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.98 2.65 25.9 -1.71 -0.04 30.6 80 4 6 1 3 1 0 0   2 4.26 5.53 29.4 -2.75 -0.58 42.8 81 5 6 1 2 1 0 0   3 4.76 5.71 30.8 -2.21 -0.33 35.3 77 4 5 1 4 3 0 0   4 1.81 2.09 31.3 -0.99 -0.26 16.8 83 2 3 2 4 2 0 0   5 3.50 4.99 41.7 -1.10 -0.18 22.2 81 5 5 3 4 2 0 0   6 1.69 1.76 45.3 -2.10 -0.55 22.9 81 5 7 4 2 2 0 0  GDP 201 A 7 1.93 2.12 45.9 -1.33 -0.35 22.4 81 3 6 3 3 3 0 0   8 1.29 1.29 47.4 -1.36 -0.55 17.9 82 4 5 2 2 1 1 0   9 1.94 2.09 48.6 -0.95 -0.36 19.1 83 2 7 2 3 1 1 0  GDP 201 A 10 3.50 4.59 51.2 -2.00 -0.36 32.2 80 6 8 2 5 2 0 0   11 1.29 1.29 61.5 -1.74 -0.42 24.2 77 5 8 1 5 3 1 0   12 2.69 3.89 61.6 -2.13 -0.37 34.8 80 7 9 1 7 3 0 0   13 1.29 1.29 64.7 -1.30 -0.38 18.8 78 6 8 3 4 3 1 0   14 2.63 4.06 86.9 -2.30 -0.51 32.1 79 7 14 3 6 3 1 0  GDP 201 E 15 2.68 4.06 91.2 -1.92 -0.47 26.4 80 8 13 5 4 2 1 0  GDP 201 E 16 1.10 1.13 134.7 -1.61 -0.53 23.1 82 10 14 6 4 3 1 0  GDP 201 E MG 202 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.