PDBsum entry 5o2s Go to PDB code:  Tunnel analysis for: 5o2s calculated with MOLE 2.0 PDB id 5o2s Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.34 35.3 -2.60 -0.61 34.7 85 6 4 2 3 0 1 0  GDP 201 A 2 1.25 1.25 39.1 -2.60 -0.59 29.2 86 8 7 4 3 1 0 0   3 1.14 1.48 45.8 -2.10 -0.61 26.5 88 6 5 3 3 1 0 0   4 1.53 1.99 17.9 -2.41 -0.25 40.4 81 6 4 0 2 0 0 0   5 1.48 2.17 18.8 -3.28 -0.57 43.5 82 6 4 1 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.