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PDBsum entry 5ke9

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Top Page protein dna_rna metals pores links
Pore analysis for: 5ke9 calculated with MOLE 2.0 PDB id
5ke9
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 1.85 28.1 -1.45 -0.47 17.5 87 5 0 1 2 1 0 0  DG 4 B DT 5 B DG 6 B DT 7 B DG 1 C DC 2 C
2 1.56 1.56 39.8 -0.67 -0.58 6.8 78 2 0 0 1 1 0 0  DG 4 B DT 5 B DG 6 B DT 7 B DC 7 C DC 8 C DT 9 C
DC 10 C
3 1.85 1.85 46.4 -1.67 -0.50 21.3 78 3 0 1 1 1 0 0  DG 1 B DA 2 B DC 10 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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