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PDBsum entry 5ke9

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Top Page protein dna_rna metals tunnels links
Tunnel analysis for: 5ke9 calculated with MOLE 2.0 PDB id
5ke9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.53 24.8 -2.25 -0.67 25.2 86 5 1 1 0 0 0 0  DA 2 B DG 3 B DT 5 B DA 4 C DC 5 C
2 1.26 1.52 26.6 -1.95 -0.70 21.4 89 5 1 1 0 0 0 0  DA 2 B DG 3 B DC 3 C DA 4 C DC 5 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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